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Daniel Tartakovsky

Title(s)Adjunct Professor, Mechanical and Aerospace Engineering
SchoolVc-academic Affairs
Address9500 Gilman Drive #0411
La Jolla CA 92093
Phone8/5-34--1375
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Learning on dynamic statistical manifolds. Proc Math Phys Eng Sci. 2020 Jul; 476(2239):20200213. Boso F, Tartakovsky DM. PMID: 32831613.
      View in: PubMed   Mentions:
    2. Stochastic self-tuning hybrid algorithm for reaction-diffusion systems. J Chem Phys. 2019 Dec 28; 151(24):244117. Ruiz-Martínez Á, Bartol TM, Sejnowski TJ, Tartakovsky DM. PMID: 31893874.
      View in: PubMed   Mentions:    Fields:    
    3. Quantification of Predictive Uncertainty in Models of FtsZ ring assembly in Escherichia coli. J Theor Biol. 2020 01 07; 484:110006. Ye Y, Ruiz-Martinez A, Wang P, Tartakovsky DM. PMID: 31539529.
      View in: PubMed   Mentions:    Fields:    
    4. A Mechanistic Analysis of Possible Blood Transfusion Failure to Increase Circulatory Oxygen Delivery in Anemic Patients. Ann Biomed Eng. 2019 Apr; 47(4):1094-1105. Zimmerman RA, Tsai AG, Intaglietta M, Tartakovsky DM. PMID: 30659435.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    5. Efficient models of polymerization applied to FtsZ ring assembly in Escherichia coli. Proc Natl Acad Sci U S A. 2018 05 08; 115(19):4933-4938. Ruiz-Martínez Á, Bartol TM, Sejnowski TJ, Tartakovsky DM. PMID: 29686085.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    6. Effects of Hydraulic Soil Properties on Vegetation Pattern Formation in Sloping Landscapes. Bull Math Biol. 2017 Dec; 79(12):2773-2784. Severino G, Giannino F, Cartení F, Mazzoleni S, Tartakovsky DM. PMID: 29052101.
      View in: PubMed   Mentions:    Fields:    
    7. Posttransfusion Increase of Hematocrit per se Does Not Improve Circulatory Oxygen Delivery due to Increased Blood Viscosity. Anesth Analg. 2017 05; 124(5):1547-1554. Zimmerman R, Tsai AG, Salazar Vázquez BY, Cabrales P, Hofmann A, Meier J, Shander A, Spahn DR, Friedman JM, Tartakovsky DM, Intaglietta M. PMID: 28328758.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    8. Noise-driven interfaces and their macroscopic representation. Phys Rev E. 2016 Nov; 94(5-1):052802. Dentz M, Neuweiler I, Méheust Y, Tartakovsky DM. PMID: 27967189.
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    9. Efficient Multiscale Models of Polymer Assembly. Biophys J. 2016 Jul 12; 111(1):185-96. Ruiz-Martinez A, Bartol TM, Sejnowski TJ, Tartakovsky DM. PMID: 27410746.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    10. Shear-Induced Nitric Oxide Production by Endothelial Cells. Biophys J. 2016 Jul 12; 111(1):208-21. Sriram K, Laughlin JG, Rangamani P, Tartakovsky DM. PMID: 27410748.
      View in: PubMed   Mentions: 7     Fields:    Translation:Cells
    11. Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium. Gigascience. 2016; 5:14. Davies N, Field D, Gavaghan D, Holbrook SJ, Planes S, Troyer M, Bonsall M, Claudet J, Roderick G, Schmitt RJ, Zettler LA, Berteaux V, Bossin HC, Cabasse C, Collin A, Deck J, Dell T, Dunne J, Gates R, Harfoot M, Hench JL, Hopuare M, Kirch P, Kotoulas G, Kosenkov A, Kusenko A, Leichter JJ, Lenihan H, Magoulas A, Martinez N, Meyer C, Stoll B, Swalla B, Tartakovsky DM, Murphy HT, Turyshev S, Valdvinos F, Williams R, Wood S. PMID: 26998258.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    12. Impact of stochastic fluctuations in the cell free layer on nitric oxide bioavailability. Front Comput Neurosci. 2015; 9:131. Park SW, Intaglietta M, Tartakovsky DM. PMID: 26578944.
      View in: PubMed   Mentions:
    13. Identifying transport behavior of single-molecule trajectories. Biophys J. 2014 Nov 18; 107(10):2345-51. Regner BM, Tartakovsky DM, Sejnowski TJ. PMID: 25418303.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    14. Replacing the Transfusion of 1-2 Units of Blood with Plasma Expanders that Increase Oxygen Delivery Capacity: Evidence from Experimental Studies. J Funct Biomater. 2014 Oct 27; 5(4):232-45. Tsai AG, Salazar Vázquez BY, Cabrales P, Kistler EB, Tartakovsky DM, Subramaniam S, Acharya SA, Intaglietta M. PMID: 25350267.
      View in: PubMed   Mentions:
    15. Vegetation pattern formation due to interactions between water availability and toxicity in plant-soil feedback. Bull Math Biol. 2014 Nov; 76(11):2866-83. Marasco A, Iuorio A, Cartení F, Bonanomi G, Tartakovsky DM, Mazzoleni S, Giannino F. PMID: 25338554.
      View in: PubMed   Mentions: 3     Fields:    Translation:Animals
    16. Non-Newtonian flow of blood in arterioles: consequences for wall shear stress measurements. Microcirculation. 2014 Oct; 21(7):628-39. Sriram K, Intaglietta M, Tartakovsky DM. PMID: 24703006.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    17. Hematocrit dispersion in asymmetrically bifurcating vascular networks. Am J Physiol Heart Circ Physiol. 2014 Dec 01; 307(11):H1576-86. Sriram K, Intaglietta M, Tartakovsky DM. PMID: 25217657.
      View in: PubMed   Mentions:
    18. A boundary-layer solution for flow at the soil-root interface. J Math Biol. 2015 Jun; 70(7):1645-68. Severino G, Tartakovsky DM. PMID: 25008964.
      View in: PubMed   Mentions:    Fields:    
    19. Information theoretic approach to complex biological network reconstruction: application to cytokine release in RAW 264.7 macrophages. BMC Syst Biol. 2014 Jun 25; 8:77. Farhangmehr F, Maurya MR, Tartakovsky DM, Subramaniam S. PMID: 24964861.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    20. Cumulative distribution function solutions of advection-reaction equations with uncertain parameters. Proc Math Phys Eng Sci. 2014 Jun 08; 470(2166):20140189. Boso F, Broyda SV, Tartakovsky DM. PMID: 24910529.
      View in: PubMed   Mentions:
    21. Anomalous diffusion of single particles in cytoplasm. Biophys J. 2013 Apr 16; 104(8):1652-60. Regner BM, Vucinic D, Domnisoru C, Bartol TM, Hetzer MW, Tartakovsky DM, Sejnowski TJ. PMID: 23601312.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    22. Probability density function method for Langevin equations with colored noise. Phys Rev Lett. 2013 Apr 05; 110(14):140602. Wang P, Tartakovsky AM, Tartakovsky DM. PMID: 25166972.
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    23. Stochastic operator-splitting method for reaction-diffusion systems. J Chem Phys. 2012 Nov 14; 137(18):184102. Choi T, Maurya MR, Tartakovsky DM, Subramaniam S. PMID: 23163359.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    24. Comparison of statistical and optimisation-based methods for data-driven network reconstruction of biochemical systems. IET Syst Biol. 2012 Oct; 6(5):155-63. Asadi B, Maurya MR, Tartakovsky DM, Subramaniam S. PMID: 23101870.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    25. Autoregulation and mechanotransduction control the arteriolar response to small changes in hematocrit. . 2012 Nov 01; 303(9):H1096-106. Sriram K, Salazar Vázquez BY, Tsai AG, Cabrales P, Intaglietta M, Tartakovsky DM. PMID: 22923620.
      View in: PubMed   Mentions:
    26. PEG-albumin supraplasma expansion is due to increased vessel wall shear stress induced by blood viscosity shear thinning. . 2012 Jun 15; 302(12):H2489-97. Sriram K, Tsai AG, Cabrales P, Meng F, Acharya SA, Tartakovsky DM, Intaglietta M. PMID: 22505638.
      View in: PubMed   Mentions:
    27. Impact of endothelium roughness on blood flow. J Theor Biol. 2012 May 07; 300:152-60. Park SW, Intaglietta M, Tartakovsky DM. PMID: 22300799.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    28. Integration of cardiovascular regulation by the blood/endothelium cell-free layer. Wiley Interdiscip Rev Syst Biol Med. 2011 Jul-Aug; 3(4):458-70. Hightower CM, Salazar Vázquez BY, Woo Park S, Sriram K, Martini J, Yalcin O, Tsai AG, Cabrales P, Tartakovsky DM, Johnson PC, Intaglietta M. PMID: 21523919.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    29. Stochastic hybrid modeling of intracellular calcium dynamics. J Chem Phys. 2010 Oct 28; 133(16):165101. Choi T, Maurya MR, Tartakovsky DM, Subramaniam S. PMID: 21033822.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    30. Elastic response of carbon nanotube forests to aerodynamic stresses. Phys Rev Lett. 2010 Oct 01; 105(14):144504. Battiato I, Bandaru PR, Tartakovsky DM. PMID: 21230836.
      View in: PubMed   Mentions: 4     Fields:    
    31. Mean arterial pressure nonlinearity in an elastic circulatory system subjected to different hematocrits. Biomech Model Mechanobiol. 2011 Jul; 10(4):591-8. Branigan T, Bolster D, Vázquez BY, Intaglietta M, Tartakovsky DM. PMID: 20878440.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    32. PDF equations for advective-reactive transport in heterogeneous porous media with uncertain properties. J Contam Hydrol. 2011 Mar 01; 120-121:129-40. Tartakovsky DM, Broyda S. PMID: 20926156.
      View in: PubMed   Mentions: 2     Fields:    
    33. The effect of small changes in hematocrit on nitric oxide transport in arterioles. Antioxid Redox Signal. 2011 Jan 15; 14(2):175-85. Sriram K, Vázquez BY, Yalcin O, Johnson PC, Intaglietta M, Tartakovsky DM. PMID: 20560785.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimals
    34. Applicability regimes for macroscopic models of reactive transport in porous media. J Contam Hydrol. 2011 Mar 01; 120-121:18-26. Battiato I, Tartakovsky DM. PMID: 20598771.
      View in: PubMed   Mentions:    Fields:    Translation:CellsPHPublic Health
    35. Functional optical imaging at the microscopic level. J Biomed Opt. 2010 Jan-Feb; 15(1):011102. Vázquez BY, Hightower CM, Sapuppo F, Tartakovsky DM, Intaglietta M. PMID: 20210428.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    36. Probabilistic risk analysis of building contamination. Indoor Air. 2008 Oct; 18(5):351-64. Bolster DT, Tartakovsky DM. PMID: 18681912.
      View in: PubMed   Mentions:    Fields:    Translation:HumansPHPublic Health
    37. Stochastic langevin model for flow and transport in porous media. Phys Rev Lett. 2008 Jul 25; 101(4):044502. Tartakovsky AM, Tartakovsky DM, Meakin P. PMID: 18764333.
      View in: PubMed   Mentions: 1     Fields:    
    38. Self-consistent four-point closure for transport in steady random flows. Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Jun; 77(6 Pt 2):066307. Dentz M, Tartakovsky DM. PMID: 18643371.
      View in: PubMed   Mentions: 1     Fields:    
    39. Asymptotic analysis of cross-hole hydraulic tests in fractured granite. Ground Water. 2006 Jul-Aug; 44(4):555-63. Illman WA, Tartakovsky DM. PMID: 16857033.
      View in: PubMed   Mentions: 1     Fields:    
    40. Prior mapping for nonlinear flows in random environments. Phys Rev E Stat Nonlin Soft Matter Phys. 2001 Sep; 64(3 Pt 2):035302. Tartakovsky DM, Guadagnini A. PMID: 11580383.
      View in: PubMed   Mentions:    Fields:    
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