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    Daniel Petras

    Address9500 Gilman Drive #0719
    CA La Jolla 92093
    Phone858-822-5437
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      Collapse Biography 
      Collapse Education and Training
      Hochschule Darmstadt / Universitat Politecnica de ValenciaDipl.-Ing.(FH)2012Biotechnology
      Technische Universitaet BerlinDr. rer. nat.2016Biological Chemistry

      Collapse Overview 

      Collapse ORNG Applications 
      Collapse Featured Publications

      Collapse Bibliographic 
      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Süssmuth R, von Eckardstein L, Seidel M, Weston JB, Grätz S, Royer M, Cociancich S, Dang T, Petras D, Sabri S, Pesic A, Kerwat D. Total synthesis and biological assessment of novel albicidins discovered by mass spectrometric networking. Chemistry. 2017 Sep 06. PMID: 28876492.
        View in: PubMed
      2. Ainsworth S, Petras D, Engmark M, Süssmuth RD, Whiteley G, Albulescu LO, Kazandjian TD, Wagstaff SC, Rowley P, Wüster W, Dorrestein PC, Arias AS, Gutiérrez JM, Harrison RA, Casewell NR, Calvete JJ. The medical threat of mamba envenoming in sub-Saharan Africa revealed by genus-wide analysis of venom composition, toxicity and antivenomics profiling of available antivenoms. J Proteomics. 2017 Aug 24. PMID: 28843532.
        View in: PubMed
      3. Nalbantsoy A, Hempel BF, Petras D, Heiss P, Göçmen B, Igci N, Yildiz MZ, Süssmuth RD. Combined venom profiling and cytotoxicity screening of the Radde's mountain viper (Montivipera raddei) and Mount Bulgar Viper (Montivipera bulgardaghica) with potent cytotoxicity against human A549 lung carcinoma cells. Toxicon. 2017 Sep 01; 135:71-83. PMID: 28625888.
        View in: PubMed
      4. Calvete JJ, Petras D, Calderón-Celis F, Lomonte B, Encinar JR, Sanz-Medel A. Protein-species quantitative venomics: looking through a crystal ball. J Venom Anim Toxins Incl Trop Dis. 2017; 23:27. PMID: 28465678.
        View in: PubMed
      5. Floros DJ, Petras D, Kapono CA, Melnik AV, Ling TJ, Knight R, Dorrestein PC. Mass Spectrometry Based Molecular 3D-Cartography of Plant Metabolites. Front Plant Sci. 2017; 8:429. PMID: 28405197.
        View in: PubMed
      6. Petras D, Jarmusch AK, Dorrestein PC. From single cells to our planet-recent advances in using mass spectrometry for spatially resolved metabolomics. Curr Opin Chem Biol. 2017 Jan 10; 36:24-31. PMID: 28086192.
        View in: PubMed
      7. Garg N, Luzzatto-Knaan T, Melnik AV, Caraballo-Rodríguez AM, Floros DJ, Petras D, Gregor R, Dorrestein PC, Phelan VV. Natural products as mediators of disease. Nat Prod Rep. 2016 Nov 22. PMID: 27874907.
        View in: PubMed
      8. Petras D, Nothias LF, Quinn RA, Alexandrov T, Bandeira N, Bouslimani A, Castro-Falcón G, Chen L, Dang T, Floros DJ, Hook VY, Garg N, Hoffner N, Jiang Y, Kapono CA, Koester I, Knight R, Leber CA, Ling T, Luzzatto-Knaan T, McCall LI, McGrath AP, Meehan MJ, Merritt JK, Mills RH, Morton J, Podvin S, Protsyuk I, Purdy T, Satterfield K, Searles S, Shah S, Shires S, Steffen D, White M, Todoric J, Tuttle R, Wojnicz A, Sapp V, Vargas F, Yang J, Zhang C, Dorrestein PC. Mass Spectrometry-Based Visualization of Molecules Associated with Human Habitats. Anal Chem. 2016 Oct 12. PMID: 27732780.
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      9. Reyna-González E, Schmid B, Petras D, Süssmuth RD, Dittmann E. Leader Peptide-Free In Vitro Reconstitution of Microviridin Biosynthesis Enables Design of Synthetic Protease-Targeted Libraries. Angew Chem Int Ed Engl. 2016 Aug 1; 55(32):9398-401. PMID: 27336908.
        View in: PubMed
      10. Petras D, Heiss P, Harrison RA, Süssmuth RD, Calvete JJ. Top-down venomics of the East African green mamba, Dendroaspis angusticeps, and the black mamba, Dendroaspis polylepis, highlight the complexity of their toxin arsenals. J Proteomics. 2016 Sep 2; 146:148-64. PMID: 27318176.
        View in: PubMed
      11. Saleh H, Petras D, Mainz A, Kerwat D, Nalbantsoy A, Erzurumlu Y, Süssmuth RD. Deuterium-Labeled Precursor Feeding Reveals a New pABA-Containing Meroterpenoid from the Mango Pathogen Xanthomonas citri pv. mangiferaeindicae. J Nat Prod. 2016 Jun 24; 79(6):1532-7. PMID: 27232656.
        View in: PubMed
      12. Meyer S, Kehr JC, Mainz A, Dehm D, Petras D, Süssmuth RD, Dittmann E. Biochemical Dissection of the Natural Diversification of Microcystin Provides Lessons for Synthetic Biology of NRPS. Cell Chem Biol. 2016 Apr 21; 23(4):462-71. PMID: 27105282.
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      13. Petras D, Kerwat D, Pesic A, Hempel BF, von Eckardstein L, Semsary S, Arasté J, Marguerettaz M, Royer M, Cociancich S, Süssmuth RD. The O-Carbamoyl-Transferase Alb15 Is Responsible for the Modification of Albicidin. ACS Chem Biol. 2016 May 20; 11(5):1198-204. PMID: 26886160.
        View in: PubMed
      14. Göçmen B, Heiss P, Petras D, Nalbantsoy A, Süssmuth RD. Mass spectrometry guided venom profiling and bioactivity screening of the Anatolian Meadow Viper, Vipera anatolica. Toxicon. 2015 Dec 1; 107(Pt B):163-74. PMID: 26385313.
        View in: PubMed
      15. Medema MH, Kottmann R, Yilmaz P, Cummings M, Biggins JB, Blin K, de Bruijn I, Chooi YH, Claesen J, Coates RC, Cruz-Morales P, Duddela S, Düsterhus S, Edwards DJ, Fewer DP, Garg N, Geiger C, Gomez-Escribano JP, Greule A, Hadjithomas M, Haines AS, Helfrich EJ, Hillwig ML, Ishida K, Jones AC, Jones CS, Jungmann K, Kegler C, Kim HU, Kötter P, Krug D, Masschelein J, Melnik AV, Mantovani SM, Monroe EA, Moore M, Moss N, Nützmann HW, Pan G, Pati A, Petras D, Reen FJ, Rosconi F, Rui Z, Tian Z, Tobias NJ, Tsunematsu Y, Wiemann P, Wyckoff E, Yan X, Yim G, Yu F, Xie Y, Aigle B, Apel AK, Balibar CJ, Balskus EP, Barona-Gómez F, Bechthold A, Bode HB, Borriss R, Brady SF, Brakhage AA, Caffrey P, Cheng YQ, Clardy J, Cox RJ, De Mot R, Donadio S, Donia MS, van der Donk WA, Dorrestein PC, Doyle S, Driessen AJ, Ehling-Schulz M, Entian KD, Fischbach MA, Gerwick L, Gerwick WH, Gross H, Gust B, Hertweck C, Höfte M, Jensen SE, Ju J, Katz L, Kaysser L, Klassen JL, Keller NP, Kormanec J, Kuipers OP, Kuzuyama T, Kyrpides NC, Kwon HJ, Lautru S, Lavigne R, Lee CY, Linquan B, Liu X, Liu W, Luzhetskyy A, Mahmud T, Mast Y, Méndez C, Metsä-Ketelä M, Micklefield J, Mitchell DA, Moore BS, Moreira LM, Müller R, Neilan BA, Nett M, Nielsen J, O'Gara F, Oikawa H, Osbourn A, Osburne MS, Ostash B, Payne SM, Pernodet JL, Petricek M, Piel J, Ploux O, Raaijmakers JM, Salas JA, Schmitt EK, Scott B, Seipke RF, Shen B, Sherman DH, Sivonen K, Smanski MJ, Sosio M, Stegmann E, Süssmuth RD, Tahlan K, Thomas CM, Tang Y, Truman AW, Viaud M, Walton JD, Walsh CT, Weber T, van Wezel GP, Wilkinson B, Willey JM, Wohlleben W, Wright GD, Ziemert N, Zhang C, Zotchev SB, Breitling R, Takano E, Glöckner FO. Minimum Information about a Biosynthetic Gene cluster. Nat Chem Biol. 2015 Aug 18; 11(9):625-31. PMID: 26284661.
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      16. Petras D, Heiss P, Süssmuth RD, Calvete JJ. Venom Proteomics of Indonesian King Cobra, Ophiophagus hannah: Integrating Top-Down and Bottom-Up Approaches. J Proteome Res. 2015 Jun 5; 14(6):2539-56. PMID: 25896403.
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      17. Pieretti I, Pesic A, Petras D, Royer M, Süssmuth RD, Cociancich S. What makes Xanthomonas albilineans unique amongst xanthomonads? Front Plant Sci. 2015; 6:289. PMID: 25964795; PMCID: PMC4408752.
      18. Cociancich S, Pesic A, Petras D, Uhlmann S, Kretz J, Schubert V, Vieweg L, Duplan S, Marguerettaz M, Noëll J, Pieretti I, Hügelland M, Kemper S, Mainz A, Rott P, Royer M, Süssmuth RD. The gyrase inhibitor albicidin consists of p-aminobenzoic acids and cyanoalanine. Nat Chem Biol. 2015 Mar; 11(3):195-7. PMID: 25599532.
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      19. Braner M, Zielonka S, Grzeschik J, Krah S, Lieb S, Petras D, Wagner X, Ahmed I, Hüttenhain SH. Hydrolysis of Fatty Acid Esters by Candida Antarctica Lipase B (Novozym435) Dissolved in Anhydrous Triethylamine. ChemCatChem. 2012; 4(12):2050-2054.
      20. Petras D, Sanz L, Segura A, Herrera M, Villalta M, Solano D, Vargas M, León G, Warrell DA, Theakston RD, Harrison RA, Durfa N, Nasidi A, Gutiérrez JM, Calvete JJ. Snake venomics of African spitting cobras: toxin composition and assessment of congeneric cross-reactivity of the pan-African EchiTAb-Plus-ICP antivenom by antivenomics and neutralization approaches. J Proteome Res. 2011 Mar 4; 10(3):1266-80. PMID: 21171584.
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      21. Koulman A, Petras D, Narayana VK, Wang L, Volmer DA. Comparative high-speed profiling of carboxylic acid metabolite levels by differential isotope-coded MALDI mass spectrometry. Anal Chem. 2009 Sep 15; 81(18):7544-51. PMID: 19702295.
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