Brian Zid

Title(s)Associate Professor, Chemistry and Biochemistry
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    A model system for pathological transitions of RNA-binding protein aggregates
    NIH R21AG064342Sep 15, 2020 - Jun 30, 2022
    Role: Principal Investigator
    Causes and consequences of differential mRNA localization to mRNP granules
    NIH R35GM128798Jul 25, 2018 - Jun 30, 2023
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. eIF5A controls mitoprotein import by relieving ribosome stalling at the TIM50 translocase mRNA. bioRxiv. 2023 Dec 19. Barba-Aliaga M, Bernal V, Rong C, Zid BM, Alepuz P. PMID: 38187585; PMCID: PMC10769225.
      View in: PubMed   Mentions:
    2. Quantification of elongation stalls and impact on gene expression in yeast. RNA. 2023 12; 29(12):1928-1938. Hou W, Harjono V, Harvey AT, Subramaniam AR, Zid BM. PMID: 37783489; PMCID: PMC10653389.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    3. Quantification of elongation stalls and impact on gene expression in yeast. bioRxiv. 2023 Mar 20. Hou W, Harjono V, Harvey AT, Subramaniam AR, Zid BM. PMID: 36993688; PMCID: PMC10055187.
      View in: PubMed   Mentions:
    4. Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation. Elife. 2022 09 15; 11. Chen YS, Hou W, Tracy S, Harvey AT, Harjono V, Xu F, Moresco JJ, Yates JR, Zid BM. PMID: 36107469; PMCID: PMC9531950.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    5. Mitochondrial mRNA localization is governed by translation kinetics and spatial transport. PLoS Comput Biol. 2022 08; 18(8):e1010413. Arceo XG, Koslover EF, Zid BM, Brown AI. PMID: 35984860; PMCID: PMC9432724.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    6. Differential translation elongation directs protein synthesis in response to acute glucose deprivation in yeast. RNA Biol. 2022; 19(1):636-649. Guzikowski AR, Harvey AT, Zhang J, Zhu S, Begovich K, Cohn MH, Wilhelm JE, Zid BM. PMID: 35491906; PMCID: PMC9067459.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    7. Post-transcriptional control of mitochondrial protein composition in changing environmental conditions. Biochem Soc Trans. 2020 12 18; 48(6):2565-2578. Tsuboi T, Leff J, Zid BM. PMID: 33245320; PMCID: PMC8108647.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    8. Mitochondrial volume fraction and translation duration impact mitochondrial mRNA localization and protein synthesis. Elife. 2020 08 07; 9. Tsuboi T, Viana MP, Xu F, Yu J, Chanchani R, Arceo XG, Tutucci E, Choi J, Chen YS, Singer RH, Rafelski SM, Zid BM. PMID: 32762840; PMCID: PMC7413667.
      View in: PubMed   Mentions: 26     Fields:    Translation:AnimalsCells
    9. A protein kinase A-regulated network encodes short- and long-lived cellular memories. Sci Signal. 2020 05 19; 13(632). Jiang Y, AkhavanAghdam Z, Li Y, Zid BM, Hao N. PMID: 32430291; PMCID: PMC7302112.
      View in: PubMed   Mentions: 7     Fields:    Translation:Animals
    10. Stress-induced mRNP granules: Form and function of processing bodies and stress granules. Wiley Interdiscip Rev RNA. 2019 05; 10(3):e1524. Guzikowski AR, Chen YS, Zid BM. PMID: 30793528; PMCID: PMC6500494.
      View in: PubMed   Mentions: 63     Fields:    Translation:Cells
    11. DDX3 suppresses type I interferons and favors viral replication during Arenavirus infection. PLoS Pathog. 2018 07; 14(7):e1007125. Loureiro ME, Zorzetto-Fernandes AL, Radoshitzky S, Chi X, Dallari S, Marooki N, Lèger P, Foscaldi S, Harjono V, Sharma S, Zid BM, López N, de la Torre JC, Bavari S, Zúñiga E. PMID: 30001425; PMCID: PMC6042795.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    12. Exonuclease EXD2 in mitochondrial translation. Nat Cell Biol. 2018 02; 20(2):120-122. Zid BM, Kapahi P. PMID: 29371705.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    13. An integrated approach reveals regulatory controls on bacterial translation elongation. Cell. 2014 Nov 20; 159(5):1200-1211. Subramaniam AR, Zid BM, O'Shea EK. PMID: 25416955; PMCID: PMC4243059.
      View in: PubMed   Mentions: 78     Fields:    Translation:Cells
    14. Promoter sequences direct cytoplasmic localization and translation of mRNAs during starvation in yeast. Nature. 2014 Oct 02; 514(7520):117-21. Zid BM, O'Shea EK. PMID: 25119046; PMCID: PMC4184922.
      View in: PubMed   Mentions: 111     Fields:    Translation:AnimalsCells
    15. Water- and nutrient-dependent effects of dietary restriction on Drosophila lifespan. Proc Natl Acad Sci U S A. 2009 Nov 03; 106(44):18633-7. Ja WW, Carvalho GB, Zid BM, Mak EM, Brummel T, Benzer S. PMID: 19841272; PMCID: PMC2773996.
      View in: PubMed   Mentions: 51     Fields:    Translation:Animals
    16. 4E-BP extends lifespan upon dietary restriction by enhancing mitochondrial activity in Drosophila. Cell. 2009 Oct 02; 139(1):149-60. Zid BM, Rogers AN, Katewa SD, Vargas MA, Kolipinski MC, Lu TA, Benzer S, Kapahi P. PMID: 19804760; PMCID: PMC2759400.
      View in: PubMed   Mentions: 294     Fields:    Translation:AnimalsCells
    17. TOR pathway: linking nutrient sensing to life span. Sci Aging Knowledge Environ. 2004 Sep 08; 2004(36):PE34. Kapahi P, Zid B. PMID: 15356349; PMCID: PMC2754831.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansAnimals
    18. Regulation of lifespan in Drosophila by modulation of genes in the TOR signaling pathway. Curr Biol. 2004 May 25; 14(10):885-90. Kapahi P, Zid BM, Harper T, Koslover D, Sapin V, Benzer S. PMID: 15186745; PMCID: PMC2754830.
      View in: PubMed   Mentions: 660     Fields:    Translation:AnimalsCells
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