Aspen Reese

Title(s)Assistant Professor, Ecology, Behavior, and Evolution
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Captive and urban environments are associated with distinct gut microbiota in deer mice (Peromyscus maniculatus). Biol Lett. 2023 03; 19(3):20220547. Diaz J, Redford KH, Reese AT. PMID: 36883780; PMCID: PMC9994099.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    2. Possibilities and limits for using the gut microbiome to improve captive animal health. Anim Microbiome. 2021 Dec 29; 3(1):89. Diaz J, Reese AT. PMID: 34965885; PMCID: PMC8715647.
      View in: PubMed   Mentions: 7  
    3. Microbial Ecology and Evolution Are Essential for Understanding Pandemics. mBio. 2021 10 26; 12(5):e0214421. Frederickson ME, Reese AT. PMID: 34579579; PMCID: PMC8546628.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansPHPublic Health
    4. Variation in Microbial Exposure at the Human-Animal Interface and the Implications for Microbiome-Mediated Health Outcome. mSystems. 2021 Aug 31; 6(4):e0056721. Kuthyar S, Reese AT. PMID: 34342530; PMCID: PMC8407385.
      View in: PubMed   Mentions:    Fields:    
    5. Gut microbiota through an evolutionary lens. Science. 2021 Apr 30; 372(6541):462-463. Carmody RN, Sarkar A, Reese AT. PMID: 33926939.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    6. Effects of domestication on the gut microbiota parallel those of human industrialization. Elife. 2021 03 23; 10. Reese AT, Chadaideh KS, Diggins CE, Schell LD, Beckel M, Callahan P, Ryan R, Emery Thompson M, Carmody RN. PMID: 33755015; PMCID: PMC7987347.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimals
    7. Age Patterning in Wild Chimpanzee Gut Microbiota Diversity Reveals Differences from Humans in Early Life. Curr Biol. 2021 02 08; 31(3):613-620.e3. Reese AT, Phillips SR, Owens LA, Venable EM, Langergraber KE, Machanda ZP, Mitani JC, Muller MN, Watts DP, Wrangham RW, Goldberg TL, Emery Thompson M, Carmody RN. PMID: 33232664; PMCID: PMC7993011.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
    8. Vortex fluidics-mediated DNA rescue from formalin-fixed museum specimens. PLoS One. 2020; 15(1):e0225807. Totoiu CA, Phillips JM, Reese AT, Majumdar S, Girguis PR, Raston CL, Weiss GA. PMID: 31999723; PMCID: PMC6992170.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    9. Influences of Ingredients and Bakers on the Bacteria and Fungi in Sourdough Starters and Bread. mSphere. 2020 01 15; 5(1). Reese AT, Madden AA, Joossens M, Lacaze G, Dunn RR. PMID: 31941818; PMCID: PMC6968659.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    10. Using DNA Metabarcoding To Evaluate the Plant Component of Human Diets: a Proof of Concept. mSystems. 2019 Oct 08; 4(5). Reese AT, Kartzinel TR, Petrone BL, Turnbaugh PJ, Pringle RM, David LA. PMID: 31594830; PMCID: PMC6787566.
      View in: PubMed   Mentions: 10     Fields:    
    11. Incorporating functional trade-offs into studies of the gut microbiota. Curr Opin Microbiol. 2019 08; 50:20-27. Reese AT, Kearney SM. PMID: 31593869.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimals
    12. Thinking Outside the Cereal Box: Noncarbohydrate Routes for Dietary Manipulation of the Gut Microbiota. Appl Environ Microbiol. 2019 05 15; 85(10). Reese AT, Carmody RN. PMID: 30504210; PMCID: PMC6498178.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimals
    13. Biodiversity-ecosystem function relationships on bodies and in buildings. Nat Ecol Evol. 2019 01; 3(1):7-9. Dunn RR, Reese AT, Eisenhauer N. PMID: 30510175; PMCID: PMC7332339.
      View in: PubMed   Mentions:    Fields:    Translation:HumansPHPublic Health
    14. Microbial nitrogen limitation in the mammalian large intestine. Nat Microbiol. 2018 12; 3(12):1441-1450. Reese AT, Pereira FC, Schintlmeister A, Berry D, Wagner M, Hale LP, Wu A, Jiang S, Durand HK, Zhou X, Premont RT, Diehl AM, O'Connell TM, Alberts SC, Kartzinel TR, Pringle RM, Dunn RR, Wright JP, David LA. PMID: 30374168; PMCID: PMC6264799.
      View in: PubMed   Mentions: 35     Fields:    Translation:AnimalsCells
    15. Drivers of Microbiome Biodiversity: A Review of General Rules, Feces, and Ignorance. mBio. 2018 07 31; 9(4). Reese AT, Dunn RR. PMID: 30065092; PMCID: PMC6069118.
      View in: PubMed   Mentions: 97     Fields:    Translation:Animals
    16. Human Gut Microbiota Predicts Susceptibility to Vibrio cholerae Infection. J Infect Dis. 2018 07 13; 218(4):645-653. Midani FS, Weil AA, Chowdhury F, Begum YA, Khan AI, Debela MD, Durand HK, Reese AT, Nimmagadda SN, Silverman JD, Ellis CN, Ryan ET, Calderwood SB, Harris JB, Qadri F, David LA, LaRocque RC. PMID: 29659916; PMCID: PMC6047457.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    17. Antibiotic-induced changes in the microbiota disrupt redox dynamics in the gut. Elife. 2018 06 19; 7. Reese AT, Cho EH, Klitzman B, Nichols SP, Wisniewski NA, Villa MM, Durand HK, Jiang S, Midani FS, Nimmagadda SN, O'Connell TM, Wright JP, Deshusses MA, David LA. PMID: 29916366; PMCID: PMC6008055.
      View in: PubMed   Mentions: 53     Fields:    Translation:HumansAnimalsCells
    18. Plant community and soil conditions individually affect soil microbial community assembly in experimental mesocosms. Ecol Evol. 2018 01; 8(2):1196-1205. Reese AT, Lulow K, David LA, Wright JP. PMID: 29375790; PMCID: PMC5773302.
      View in: PubMed   Mentions: 4  
    19. Variation in Plant Response to Herbivory Underscored by Functional Traits. PLoS One. 2016; 11(12):e0166714. Reese AT, Ames GM, Wright JP. PMID: 27936155; PMCID: PMC5147848.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    20. Urban stress is associated with variation in microbial species composition-but not richness-in Manhattan. ISME J. 2016 Mar; 10(3):751-60. Reese AT, Savage A, Youngsteadt E, McGuire KL, Koling A, Watkins O, Frank SD, Dunn RR. PMID: 26394011; PMCID: PMC4817683.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    21. Skeletal indicators of ecological specialization in pika (Mammalia, Ochotonidae). J Morphol. 2013 May; 274(5):585-602. Reese AT, Lanier HC, Sargis EJ. PMID: 23381921.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
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