Andrew Liu

Title(s)	RESID PHYS/SUBSPEC 4-8/REP, Medicine
School	Vc-health Sciences-schools
Address	9500 Gilman Drive # La Jolla CA 92093
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Research

Research Activities and Funding

Molecular, cellular and physiological mechanisms of the mammalian circadian clock
NIH R01NS054794May 1, 2007 - Feb 28, 2023
Role: Co-Principal Investigator

Bibliographic

Publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

PSMD11 modulates circadian clock function through PER and CRY nuclear translocation. PLoS One. 2023; 18(3):e0283463. Cal-Kayitmazbatir S, Francey LJ, Lee Y, Liu AC, Hogenesch JB. PMID: 36961772; PMCID: PMC10038281.

View in: PubMed Mentions: Fields:
Med Medicine (General)Sci Science
Translation:Cells
NF-κB modifies the mammalian circadian clock through interaction with the core clock protein BMAL1. PLoS Genet. 2021 11; 17(11):e1009933. Shen Y, Endale M, Wang W, Morris AR, Francey LJ, Harold RL, Hammers DW, Huo Z, Partch CL, Hogenesch JB, Wu ZH, Liu AC. PMID: 34807912; PMCID: PMC8648109.

View in: PubMed Mentions: 14 Fields:
Gen Genetics
Translation:Humans Animals Cells
The eIF2α Kinase GCN2 Modulates Period and Rhythmicity of the Circadian Clock by Translational Control of Atf4. Neuron. 2019 11 20; 104(4):724-735.e6. Pathak SS, Liu D, Li T, de Zavalia N, Zhu L, Li J, Karthikeyan R, Alain T, Liu AC, Storch KF, Kaufman RJ, Jin VX, Amir S, Sonenberg N, Cao R. PMID: 31522764; PMCID: PMC6872934.

View in: PubMed Mentions: 26 Fields:
Neu Neurology
Translation:Animals
The NRON complex controls circadian clock function through regulated PER and CRY nuclear translocation. Sci Rep. 2019 08 15; 9(1):11883. Lee Y, Shen Y, Francey LJ, Ramanathan C, Sehgal A, Liu AC, Hogenesch JB. PMID: 31417156; PMCID: PMC6695496.

View in: PubMed Mentions: 14 Fields:
Sci Science
Translation:Humans Animals Cells
mTOR signaling regulates central and peripheral circadian clock function. PLoS Genet. 2018 05; 14(5):e1007369. Ramanathan C, Kathale ND, Liu D, Lee C, Freeman DA, Hogenesch JB, Cao R, Liu AC. PMID: 29750810; PMCID: PMC5965903.

View in: PubMed Mentions: 71 Fields:
Gen Genetics
Translation:Animals Cells
Guidelines for Genome-Scale Analysis of Biological Rhythms. J Biol Rhythms. 2017 Oct; 32(5):380-393. Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, Crowell AM, DeBruyne JP, Dijk DJ, DiTacchio L, Doyle FJ, Duffield GE, Dunlap JC, Eckel-Mahan K, Esser KA, FitzGerald GA, Forger DB, Francey LJ, Fu YH, Gachon F, Gatfield D, de Goede P, Golden SS, Green C, Harer J, Harmer S, Haspel J, Hastings MH, Herzel H, Herzog ED, Hoffmann C, Hong C, Hughey JJ, Hurley JM, de la Iglesia HO, Johnson C, Kay SA, Koike N, Kornacker K, Kramer A, Lamia K, Leise T, Lewis SA, Li J, Li X, Liu AC, Loros JJ, Martino TA, Menet JS, Merrow M, Millar AJ, Mockler T, Naef F, Nagoshi E, Nitabach MN, Olmedo M, Nusinow DA, Ptácek LJ, Rand D, Reddy AB, Robles MS, Roenneberg T, Rosbash M, Ruben MD, Rund SSC, Sancar A, Sassone-Corsi P, Sehgal A, Sherrill-Mix S, Skene DJ, Storch KF, Takahashi JS, Ueda HR, Wang H, Weitz C, Westermark PO, Wijnen H, Xu Y, Wu G, Yoo SH, Young M, Zhang EE, Zielinski T, Hogenesch JB. PMID: 29098954; PMCID: PMC5692188.

View in: PubMed Mentions: 91 Fields:
Phy Physiology
Translation:Humans
A Slow Conformational Switch in the BMAL1 Transactivation Domain Modulates Circadian Rhythms. Mol Cell. 2017 May 18; 66(4):447-457.e7. Gustafson CL, Parsley NC, Asimgil H, Lee HW, Ahlbach C, Michael AK, Xu H, Williams OL, Davis TL, Liu AC, Partch CL. PMID: 28506462; PMCID: PMC5484534.

View in: PubMed Mentions: 37 Fields:
Cel Cell Biology Mol Molecular Biology
Translation:Humans Animals Cells
CREBH Couples Circadian Clock With Hepatic Lipid Metabolism. Diabetes. 2016 Nov; 65(11):3369-3383. Zheng Z, Kim H, Qiu Y, Chen X, Mendez R, Dandekar A, Zhang X, Zhang C, Liu AC, Yin L, Lin JD, Walker PD, Kapatos G, Zhang K. PMID: 27507854; PMCID: PMC5079639.

View in: PubMed Mentions: 40 Fields:
End Endocrinology
Translation:Animals Cells
Mammalian retinal Müller cells have circadian clock function. Mol Vis. 2016; 22:275-83. Xu L, Ruan G, Dai H, Liu AC, Penn J, McMahon DG. PMID: 27081298; PMCID: PMC4812508.

View in: PubMed Mentions: 14 Fields:
Mol Molecular Biology Oph Ophthalmology
Translation:Humans Animals Cells
Cryptochrome 1 regulates the circadian clock through dynamic interactions with the BMAL1 C terminus. Nat Struct Mol Biol. 2015 Jun; 22(6):476-484. Xu H, Gustafson CL, Sammons PJ, Khan SK, Parsley NC, Ramanathan C, Lee HW, Liu AC, Partch CL. PMID: 25961797; PMCID: PMC4456216.

View in: PubMed Mentions: 82 Fields:
Mol Molecular Biology
Translation:Humans Animals Cells
Light-regulated translational control of circadian behavior by eIF4E phosphorylation. Nat Neurosci. 2015 Jun; 18(6):855-62. Cao R, Gkogkas CG, de Zavalia N, Blum ID, Yanagiya A, Tsukumo Y, Xu H, Lee C, Storch KF, Liu AC, Amir S, Sonenberg N. PMID: 25915475; PMCID: PMC4446158.

View in: PubMed Mentions: 45 Fields:
Neu Neurology
Translation:Animals Cells
Machine learning helps identify CHRONO as a circadian clock component. PLoS Biol. 2014 Apr; 12(4):e1001840. Anafi RC, Lee Y, Sato TK, Venkataraman A, Ramanathan C, Kavakli IH, Hughes ME, Baggs JE, Growe J, Liu AC, Kim J, Hogenesch JB. PMID: 24737000; PMCID: PMC3988006.

View in: PubMed Mentions: 63 Fields:
Bio Biology
Translation:Humans Animals Cells
Cell type-specific functions of period genes revealed by novel adipocyte and hepatocyte circadian clock models. PLoS Genet. 2014 Apr; 10(4):e1004244. Ramanathan C, Xu H, Khan SK, Shen Y, Gitis PJ, Welsh DK, Hogenesch JB, Liu AC. PMID: 24699442; PMCID: PMC3974647.

View in: PubMed Mentions: 39 Fields:
Gen Genetics
Translation:Animals Cells
Translational control of entrainment and synchrony of the suprachiasmatic circadian clock by mTOR/4E-BP1 signaling. Neuron. 2013 Aug 21; 79(4):712-24. Cao R, Robinson B, Xu H, Gkogkas C, Khoutorsky A, Alain T, Yanagiya A, Nevarko T, Liu AC, Amir S, Sonenberg N. PMID: 23972597; PMCID: PMC3856944.

View in: PubMed Mentions: 71 Fields:
Neu Neurology
Translation:Animals Cells
Cry1-/- circadian rhythmicity depends on SCN intercellular coupling. J Biol Rhythms. 2012 Dec; 27(6):443-52. Evans JA, Pan H, Liu AC, Welsh DK. PMID: 23223370; PMCID: PMC3578226.

View in: PubMed Mentions: 21 Fields:
Phy Physiology
Translation:Animals
Identification of a novel cryptochrome differentiating domain required for feedback repression in circadian clock function. J Biol Chem. 2012 Jul 27; 287(31):25917-26. Khan SK, Xu H, Ukai-Tadenuma M, Burton B, Wang Y, Ueda HR, Liu AC. PMID: 22692217; PMCID: PMC3406676.

View in: PubMed Mentions: 45 Fields:
Bio Biochemistry
Translation:Humans Cells
Circadian regulation of ATP release in astrocytes. J Neurosci. 2011 Jun 08; 31(23):8342-50. Marpegan L, Swanstrom AE, Chung K, Simon T, Haydon PG, Khan SK, Liu AC, Herzog ED, Beaulé C. PMID: 21653839; PMCID: PMC3135876.

View in: PubMed Mentions: 82 Fields:
Neu Neurology
Translation:Animals Cells
Delay in feedback repression by cryptochrome 1 is required for circadian clock function. Cell. 2011 Jan 21; 144(2):268-81. Ukai-Tadenuma M, Yamada RG, Xu H, Ripperger JA, Liu AC, Ueda HR. PMID: 21236481.

View in: PubMed Mentions: 132 Fields:
Cel Cell Biology
Translation:Animals Cells
Emergence of noise-induced oscillations in the central circadian pacemaker. PLoS Biol. 2010 Oct 12; 8(10):e1000513. Ko CH, Yamada YR, Welsh DK, Buhr ED, Liu AC, Zhang EE, Ralph MR, Kay SA, Forger DB, Takahashi JS. PMID: 20967239; PMCID: PMC2953532.

View in: PubMed Mentions: 105 Fields:
Bio Biology
Translation:Animals Cells
Cryptochrome mediates circadian regulation of cAMP signaling and hepatic gluconeogenesis. Nat Med. 2010 Oct; 16(10):1152-6. Zhang EE, Liu Y, Dentin R, Pongsawakul PY, Liu AC, Hirota T, Nusinow DA, Sun X, Landais S, Kodama Y, Brenner DA, Montminy M, Kay SA. PMID: 20852621; PMCID: PMC2952072.

View in: PubMed Mentions: 254 Fields:
Med Medicine (General)Mol Molecular Biology
Translation:Animals Cells
A genome-wide RNAi screen for modifiers of the circadian clock in human cells. Cell. 2009 Oct 02; 139(1):199-210. Zhang EE, Liu AC, Hirota T, Miraglia LJ, Welch G, Pongsawakul PY, Liu X, Atwood A, Huss JW, Janes J, Su AI, Hogenesch JB, Kay SA. PMID: 19765810; PMCID: PMC2777987.

View in: PubMed Mentions: 226 Fields:
Cel Cell Biology
Translation:Humans Cells
A model of the cell-autonomous mammalian circadian clock. Proc Natl Acad Sci U S A. 2009 Jul 07; 106(27):11107-12. Mirsky HP, Liu AC, Welsh DK, Kay SA, Doyle FJ. PMID: 19549830; PMCID: PMC2699375.

View in: PubMed Mentions: 84 Fields:
Sci Science
Translation:Animals
A chemical biology approach reveals period shortening of the mammalian circadian clock by specific inhibition of GSK-3beta. Proc Natl Acad Sci U S A. 2008 Dec 30; 105(52):20746-51. Hirota T, Lewis WG, Liu AC, Lee JW, Schultz PG, Kay SA. PMID: 19104043; PMCID: PMC2606900.

View in: PubMed Mentions: 148 Fields:
Sci Science
Translation:Humans Cells
Redundant function of REV-ERBalpha and beta and non-essential role for Bmal1 cycling in transcriptional regulation of intracellular circadian rhythms. PLoS Genet. 2008 Feb 29; 4(2):e1000023. Liu AC, Tran HG, Zhang EE, Priest AA, Welsh DK, Kay SA. PMID: 18454201; PMCID: PMC2265523.

View in: PubMed Mentions: 206 Fields:
Gen Genetics
Translation:Animals Cells
Mammalian circadian signaling networks and therapeutic targets. Nat Chem Biol. 2007 Oct; 3(10):630-9. Liu AC, Lewis WG, Kay SA. PMID: 17876320.

View in: PubMed Mentions: 71 Fields:
Bio Biology Che Chemistry
Translation:Animals Cells
Intercellular coupling confers robustness against mutations in the SCN circadian clock network. Cell. 2007 May 04; 129(3):605-16. Liu AC, Welsh DK, Ko CH, Tran HG, Zhang EE, Priest AA, Buhr ED, Singer O, Meeker K, Verma IM, Doyle FJ, Takahashi JS, Kay SA. PMID: 17482552; PMCID: PMC3749832.

View in: PubMed Mentions: 331 Fields:
Cel Cell Biology
Translation:Animals Cells
Bioluminescence imaging of individual fibroblasts reveals persistent, independently phased circadian rhythms of clock gene expression. Curr Biol. 2004 Dec 29; 14(24):2289-95. Welsh DK, Yoo SH, Liu AC, Takahashi JS, Kay SA. PMID: 15620658; PMCID: PMC3777438.

View in: PubMed Mentions: 286 Fields:
Bio Biology
Translation:Animals Cells