Alexander Rose
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School | Vc-academic Affairs |
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Address | 9500 Gilman Drive # La Jolla CA 92093
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vCard | Download vCard |
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Bibliographic
Altmetrics Details
PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media.
(Note that publications are often cited in additional ways that are not shown here.)
Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication.
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Click a Field or Translation tag to filter the publications.
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High-performance macromolecular data delivery and visualization for the web. Corrigendum. Acta Crystallogr D Struct Biol. 2021 Jan 01; 77(Pt 1):126.
Sehnal D, Svobodová R, Berka K, Rose AS, Burley SK, Velankar S, Koca J. PMID: 33404533.
View in: PubMed Mentions:
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Real-time structural motif searching in proteins using an inverted index strategy. PLoS Comput Biol. 2020 Dec; 16(12):e1008502.
Bittrich S, Burley SK, Rose AS. PMID: 33284792.
View in: PubMed Mentions: 1 Fields:
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High-performance macromolecular data delivery and visualization for the web. Acta Crystallogr D Struct Biol. 2020 Dec 01; 76(Pt 12):1167-1173.
Sehnal D, Svobodová R, Berka K, Rose AS, Burley SK, Velankar S, Koca J. PMID: 33263322.
View in: PubMed Mentions:
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RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences. Nucleic Acids Res. 2020 Nov 19.
Burley SK, Bhikadiya C, Bi C, Bittrich S, Chen L, Crichlow GV, Christie CH, Dalenberg K, Di Costanzo L, Duarte JM, Dutta S, Feng Z, Ganesan S, Goodsell DS, Ghosh S, Green RK, Guranovic V, Guzenko D, Hudson BP, Lawson CL, Liang Y, Lowe R, Namkoong H, Peisach E, Persikova I, Randle C, Rose A, Rose Y, Sali A, Segura J, Sekharan M, Shao C, Tao YP, Voigt M, Westbrook JD, Young JY, Zardecki C, Zhuravleva M. PMID: 33211854.
View in: PubMed Mentions: 1 Fields:
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RCSB Protein Data Bank: Architectural Advances Towards Integrated Searching and Efficient Access to Macromolecular Structure Data from the PDB Archive. J Mol Biol. 2020 Nov 10.
Rose Y, Duarte JM, Lowe R, Segura J, Bi C, Bhikadiya C, Chen L, Rose AS, Bittrich S, Burley SK, Westbrook JD. PMID: 33186584.
View in: PubMed Mentions: Fields:
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BinaryCIF and CIFTools-Lightweight, efficient and extensible macromolecular data management. PLoS Comput Biol. 2020 10; 16(10):e1008247.
Sehnal D, Bittrich S, Velankar S, Koca J, Svobodová R, Burley SK, Rose AS. PMID: 33075050.
View in: PubMed Mentions: 1 Fields:
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RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy. Nucleic Acids Res. 2019 01 08; 47(D1):D464-D474.
Burley SK, Berman HM, Bhikadiya C, Bi C, Chen L, Di Costanzo L, Christie C, Dalenberg K, Duarte JM, Dutta S, Feng Z, Ghosh S, Goodsell DS, Green RK, Guranovic V, Guzenko D, Hudson BP, Kalro T, Liang Y, Lowe R, Namkoong H, Peisach E, Periskova I, Prlic A, Randle C, Rose A, Rose P, Sala R, Sekharan M, Shao C, Tan L, Tao YP, Valasatava Y, Voigt M, Westbrook J, Woo J, Yang H, Young J, Zhuravleva M, Zardecki C. PMID: 30357411.
View in: PubMed Mentions: 124 Fields: Translation: Cells
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NGL viewer: web-based molecular graphics for large complexes. Bioinformatics. 2018 11 01; 34(21):3755-3758.
Rose AS, Bradley AR, Valasatava Y, Duarte JM, Prlic A, Rose PW. PMID: 29850778.
View in: PubMed Mentions: 77 Fields:
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FragFit: a web-application for interactive modeling of protein segments into cryo-EM density maps. Nucleic Acids Res. 2018 07 02; 46(W1):W310-W314.
Tiemann JK, Rose AS, Ismer J, Darvish MD, Hilal T, Spahn CM, Hildebrand PW. PMID: 29788317.
View in: PubMed Mentions: Fields: Translation: Cells
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MDsrv: viewing and sharing molecular dynamics simulations on the web. Nat Methods. 2017 11 30; 14(12):1123-1124.
Tiemann JKS, Guixà-González R, Hildebrand PW, Rose AS. PMID: 29190271.
View in: PubMed Mentions: 6 Fields: Translation: Cells
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A fragment based method for modeling of protein segments into cryo-EM density maps. BMC Bioinformatics. 2017 Nov 13; 18(1):475.
Ismer J, Rose AS, Tiemann JKS, Hildebrand PW. PMID: 29132296.
View in: PubMed Mentions: 1 Fields: Translation: Cells
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MMTF-An efficient file format for the transmission, visualization, and analysis of macromolecular structures. PLoS Comput Biol. 2017 Jun; 13(6):e1005575.
Bradley AR, Rose AS, Pavelka A, Valasatava Y, Duarte JM, Prlic A, Rose PW. PMID: 28574982.
View in: PubMed Mentions: 11 Fields: Translation: Cells
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Towards an efficient compression of 3D coordinates of macromolecular structures. PLoS One. 2017; 12(3):e0174846.
Valasatava Y, Bradley AR, Rose AS, Duarte JM, Prlic A, Rose PW. PMID: 28362865.
View in: PubMed Mentions: 6 Fields: Translation: Cells
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The RCSB protein data bank: integrative view of protein, gene and 3D structural information. Nucleic Acids Res. 2017 01 04; 45(D1):D271-D281.
Rose PW, Prlic A, Altunkaya A, Bi C, Bradley AR, Christie CH, Costanzo LD, Duarte JM, Dutta S, Feng Z, Green RK, Goodsell DS, Hudson B, Kalro T, Lowe R, Peisach E, Randle C, Rose AS, Shao C, Tao YP, Valasatava Y, Voigt M, Westbrook JD, Woo J, Yang H, Young JY, Zardecki C, Berman HM, Burley SK. PMID: 27794042.
View in: PubMed Mentions: 159 Fields: Translation: Cells
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SL2: an interactive webtool for modeling of missing segments in proteins. Nucleic Acids Res. 2016 07 08; 44(W1):W390-4.
Ismer J, Rose AS, Tiemann JK, Goede A, Preissner R, Hildebrand PW. PMID: 27105847.
View in: PubMed Mentions: 8 Fields: Translation: Cells
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NGL Viewer: a web application for molecular visualization. Nucleic Acids Res. 2015 Jul 01; 43(W1):W576-9.
Rose AS, Hildebrand PW. PMID: 25925569.
View in: PubMed Mentions: 92 Fields: Translation: Cells
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MP:PD--a data base of internal packing densities, internal packing defects and internal waters of helical membrane proteins. Nucleic Acids Res. 2014 Jan; 42(Database issue):D347-51.
Rose A, Theune D, Goede A, Hildebrand PW. PMID: 24194596.
View in: PubMed Mentions: 6 Fields: Translation: Cells
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Voronoia4RNA--a database of atomic packing densities of RNA structures and their complexes. Nucleic Acids Res. 2013 Jan; 41(Database issue):D280-4.
Ismer J, Rose AS, Tiemann JK, Goede A, Rother K, Hildebrand PW. PMID: 23161674.
View in: PubMed Mentions: 3 Fields: Translation: Cells
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MPlot--a server to analyze and visualize tertiary structure contacts and geometrical features of helical membrane proteins. Nucleic Acids Res. 2010 Jul; 38(Web Server issue):W602-8.
Rose A, Goede A, Hildebrand PW. PMID: 20484376.
View in: PubMed Mentions: 3 Fields: Translation: Cells
This graph shows the total number of publications by year. To see the data as text, click here.
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Year | Publications |
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2010 | 1 | 2012 | 1 | 2013 | 1 | 2015 | 1 | 2016 | 2 | 2017 | 4 | 2018 | 2 | 2019 | 1 | 2020 | 5 | 2021 | 1 |
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
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