Kelly Frazer

Title(s)Professor, Pediatrics
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
vCardDownload vCard

    Collapse Research 
    Collapse Research Activities and Funding
    Genetic & Social Determinants of Health: Center for Admixture Science and Technology
    NIH RM1HG011558Sep 22, 2021 - Jun 30, 2026
    Role: Co-Principal Investigator
    Unraveling the molecular pathology of retinal degeneration through single cell genomics
    NIH R01EY031663Jun 1, 2021 - May 31, 2026
    Role: Co-Principal Investigator
    Omics Data Generation Center (ODGC) for the Acute to Chronic Pain Signatures (A2CPS) Program
    NIH U54DA049115Sep 1, 2019 - Jul 31, 2023
    Role: Co-Principal Investigator
    Fine-mapping and functional analysis of T1D-associated variants
    NIH DP3DK112155Sep 30, 2016 - May 31, 2021
    Role: Principal Investigator
    Functional Analysis of T2D Associated Non-coding SNPs
    NIH U01DK105541May 1, 2015 - Apr 30, 2020
    Role: Principal Investigator
    Optimizing HaploSeq for whole-genome phased haplotypes in biomedical applications
    NIH R41HG008118Mar 1, 2015 - Jan 31, 2017
    Role: Principal Investigator
    REGULATORY GENOMIC STUDIES IN A COHORT OF IPS CELL DERIVED CARDIOMYOCYTES
    NIH U01HL107442Jul 15, 2011 - Jun 30, 2017
    Role: Principal Investigator
    Biomarkers of Disease Progression in CLL
    NIH R21CA152613Jun 1, 2010 - May 31, 2012
    Role: Principal Investigator
    Large-Scale Low-Cost Genotyping for the Haplotype Map
    NIH U54HG003642Sep 20, 2004 - Aug 31, 2006
    Role: Principal Investigator
    Genetic Association in Austism Disorder
    NIH R43MH072249Aug 6, 2004 - Jul 31, 2005
    Role: Principal Investigator
    Evolutionary Conserved Sequences in the Human Genome
    NIH R44HG002638Sep 30, 2002 - Dec 31, 2005
    Role: Principal Investigator
    CONSERVED REGULATORY SEQUENCES IN HUMANS AND MICE
    NIH R01GM057482May 1, 1998 - Apr 30, 2003
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Complex regulatory networks influence pluripotent cell state transitions in human iPSCs. Nat Commun. 2024 Feb 23; 15(1):1664. Arthur TD, Nguyen JP, D'Antonio-Chronowska A, Matsui H, Silva NS, Joshua IN, iPSCORE Consortium, Luchessi AD, Greenwald WWY, D'Antonio M, Pera MF, Frazer KA. PMID: 38395976.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    2. eQTL mapping in fetal-like pancreatic progenitor cells reveals early developmental insights into diabetes risk. Nat Commun. 2023 10 30; 14(1):6928. Nguyen JP, Arthur TD, Fujita K, Salgado BM, Donovan MKR, iPSCORE Consortium, Matsui H, Kim JH, D'Antonio-Chronowska A, D'Antonio M, Frazer KA. PMID: 37903777; PMCID: PMC10616100.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    3. Single-nucleotide variants within heart enhancers increase binding affinity and disrupt heart development. Dev Cell. 2023 11 06; 58(21):2206-2216.e5. Jindal GA, Bantle AT, Solvason JJ, Grudzien JL, D'Antonio-Chronowska A, Lim F, Le SH, Song BP, Ragsac MF, Klie A, Larsen RO, Frazer KA, Farley EK. PMID: 37848026; PMCID: PMC10720985.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    4. Analysis of regulatory network modules in hundreds of human stem cell lines reveals complex epigenetic and genetic factors contribute to pluripotency state differences between subpopulations. bioRxiv. 2023 Sep 19. Arthur TD, Nguyen JP, D'Antonio-Chronowska A, Matsui H, Silva NS, Joshua IN, iPSCORE Consortium, Luchessi AD, Young Greenwald WW, D'Antonio M, Pera MF, Frazer KA. PMID: 37292794; PMCID: PMC10245835.
      View in: PubMed   Mentions:
    5. Author Correction: Fine mapping spatiotemporal mechanisms of genetic variants underlying cardiac traits and disease. Nat Commun. 2023 Jul 20; 14(1):4370. D'Antonio M, Nguyen JP, Arthur TD, iPSCORE Consortium, Matsui H, D'Antonio-Chronowska A, Frazer KA. PMID: 37474502; PMCID: PMC10359269.
      View in: PubMed   Mentions:    Fields:    
    6. The human pangenome reference anticipates equitable and fundamental genomic insights. Cell Genom. 2023 Jul 12; 3(7):100360. Frazer KA, Schork NJ. PMID: 37492100; PMCID: PMC10363913.
      View in: PubMed   Mentions:
    7. Fine mapping spatiotemporal mechanisms of genetic variants underlying cardiac traits and disease. Nat Commun. 2023 02 28; 14(1):1132. D'Antonio M, Nguyen JP, Arthur TD, iPSCORE Consortium, Matsui H, D'Antonio-Chronowska A, Frazer KA. PMID: 36854752; PMCID: PMC9975214.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    8. Type 1 diabetes risk genes mediate pancreatic beta cell survival in response to proinflammatory cytokines. Cell Genom. 2022 Dec 14; 2(12):100214. Benaglio P, Zhu H, Okino ML, Yan J, Elgamal R, Nariai N, Beebe E, Korgaonkar K, Qiu Y, Donovan MKR, Chiou J, Wang G, Newsome J, Kaur J, Miller M, Preissl S, Corban S, Aylward A, Taipale J, Ren B, Frazer KA, Sander M, Gaulton KJ. PMID: 36778047; PMCID: PMC9903835.
      View in: PubMed   Mentions: 3  
    9. Systems genomics in age-related macular degeneration. Exp Eye Res. 2022 12; 225:109248. den Hollander AI, Mullins RF, Orozco LD, Voigt AP, Chen HH, Strunz T, Grassmann F, Haines JL, Kuiper JJW, Tumminia SJ, Allikmets R, Hageman GS, Stambolian D, Klaver CCW, Boeke JD, Chen H, Honigberg L, Katti S, Frazer KA, Weber BHF, Gorin MB. PMID: 36108770; PMCID: PMC10150562.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    10. SARS-CoV-2 susceptibility and COVID-19 disease severity are associated with genetic variants affecting gene expression in a variety of tissues. Cell Rep. 2022 Jun 14; 39(11):110968. D'Antonio M, Nguyen JP, Arthur TD, Matsui H, COVID-19 Host Genetics Initiative, D'Antonio-Chronowska A, Frazer KA. PMID: 35705058; PMCID: PMC9195561.
      View in: PubMed   Mentions:    Fields:    
    11. In heart failure reactivation of RNA-binding proteins is associated with the expression of 1,523 fetal-specific isoforms. PLoS Comput Biol. 2022 02; 18(2):e1009918. D'Antonio M, Nguyen JP, Arthur TD, Matsui H, Donovan MKR, D'Antonio-Chronowska A, Frazer KA. PMID: 35226669; PMCID: PMC8912908.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    12. Ultra-Sharp Nanowire Arrays Natively Permeate, Record, and Stimulate Intracellular Activity in Neuronal and Cardiac Networks. Adv Funct Mater. 2022 Feb 16; 32(8). Liu R, Lee J, Tchoe Y, Pre D, Bourhis AM, D'Antonio-Chronowska A, Robin G, Lee SH, Ro YG, Vatsyayan R, Tonsfeldt KJ, Hossain LA, Phipps ML, Yoo J, Nogan J, Martinez JS, Frazer KA, Bang AG, Dayeh SA. PMID: 35603230; PMCID: PMC9122115.
      View in: PubMed   Mentions: 7  
    13. SARS-CoV-2 susceptibility and COVID-19 disease severity are associated with genetic variants affecting gene expression in a variety of tissues. Cell Rep. 2021 11 16; 37(7):110020. D'Antonio M, Nguyen JP, Arthur TD, Matsui H, COVID-19 Host Genetics Initiative, D'Antonio-Chronowska A, Frazer KA. PMID: 34762851; PMCID: PMC8563343.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    14. Deciphering the genetic architecture and ethnographic distribution of IRD in three ethnic populations by whole genome sequence analysis. PLoS Genet. 2021 10; 17(10):e1009848. Biswas P, Villanueva AL, Soto-Hermida A, Duncan JL, Matsui H, Borooah S, Kurmanov B, Richard G, Khan SY, Branham K, Huang B, Suk J, Bakall B, Goldberg JL, Gabriel L, Khan NW, Raghavendra PB, Zhou J, Devalaraja S, Huynh A, Alapati A, Zawaydeh Q, Weleber RG, Heckenlively JR, Hejtmancik JF, Riazuddin S, Sieving PA, Riazuddin SA, Frazer KA, Ayyagari R. PMID: 34662339; PMCID: PMC8589175.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    15. Genomics Links Inflammation With Neurocognitive Impairment in Children Living With Human Immunodeficiency Virus Type-1. J Infect Dis. 2021 09 01; 224(5):870-880. Rawat P, Brummel SS, Singh KK, Kim J, Frazer KA, Nichols S, Seage GR, Williams PL, Van Dyke RB, Harismendy O, Trout RN, Spector SA. PMID: 33373444; PMCID: PMC8408770.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCellsPHPublic Health
    16. Enhancer release and retargeting activates disease-susceptibility genes. Nature. 2021 07; 595(7869):735-740. Oh S, Shao J, Mitra J, Xiong F, D'Antonio M, Wang R, Garcia-Bassets I, Ma Q, Zhu X, Lee JH, Nair SJ, Yang F, Ohgi K, Frazer KA, Zhang ZD, Li W, Rosenfeld MG. PMID: 34040254.
      View in: PubMed   Mentions: 43     Fields:    Translation:HumansCells
    17. Insights into genetic factors contributing to variability in SARS-CoV-2 susceptibility and COVID-19 disease severity. medRxiv. 2021 May 12. D'Antonio M, COVID-19 Host Genetics Initiative, Arthur TD, Nguyen JP, Matsui H, D'Antonio-Chronowska A, Frazer KA. PMID: 34013287; PMCID: PMC8132261.
      View in: PubMed   Mentions:
    18. Identification of rare and common regulatory variants in pluripotent cells using population-scale transcriptomics. Nat Genet. 2021 03; 53(3):313-321. Bonder MJ, Smail C, Gloudemans MJ, Frésard L, Jakubosky D, D'Antonio M, Li X, Ferraro NM, Carcamo-Orive I, Mirauta B, Seaton DD, Cai N, Vakili D, Horta D, Zhao C, Zastrow DB, Bonner DE, HipSci Consortium, iPSCORE consortium, Undiagnosed Diseases Network, PhLiPS consortium, Wheeler MT, Kilpinen H, Knowles JW, Smith EN, Frazer KA, Montgomery SB, Stegle O. PMID: 33664507; PMCID: PMC7944648.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    19. Systematic analysis of binding of transcription factors to noncoding variants. Nature. 2021 03; 591(7848):147-151. Yan J, Qiu Y, Ribeiro Dos Santos AM, Yin Y, Li YE, Vinckier N, Nariai N, Benaglio P, Raman A, Li X, Fan S, Chiou J, Chen F, Frazer KA, Gaulton KJ, Sander M, Taipale J, Ren B. PMID: 33505025; PMCID: PMC9367673.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansCells
    20. Detection and validation of novel mutations in MERTK in a simplex case of retinal degeneration using WGS and hiPSC-RPEs model. Hum Mutat. 2021 02; 42(2):189-199. Biswas P, Borooah S, Matsui H, Voronchikhina M, Zhou J, Zawaydeh Q, Raghavendra PB, Ferreyra H, Riazuddin SA, Wahlin K, Frazer KA, Ayyagari R. PMID: 33252167; PMCID: PMC7878419.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    21. In vitro Differentiation of Human iPSC-derived Cardiovascular Progenitor Cells (iPSC-CVPCs). Bio Protoc. 2020 Sep 20; 10(18):e3755. D'Antonio-Chronowska A, D'Antonio M, Frazer KA. PMID: 33659414; PMCID: PMC7853936.
      View in: PubMed   Mentions: 5  
    22. Revealing Instability: Genetic Variation Underlies Variability in mESC Pluripotency. Cell Stem Cell. 2020 09 03; 27(3):347-349. D'Antonio M, D'Antonio-Chronowska A, Frazer KA. PMID: 32888420.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    23. Author Correction: Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants. Nat Commun. 2020 09 01; 11(1):4426. Donovan MKR, D'Antonio-Chronowska A, D'Antonio M, Frazer KA. PMID: 32873812; PMCID: PMC7462847.
      View in: PubMed   Mentions: 1     Fields:    
    24. Properties of structural variants and short tandem repeats associated with gene expression and complex traits. Nat Commun. 2020 06 10; 11(1):2927. Jakubosky D, D'Antonio M, Bonder MJ, Smail C, Donovan MKR, Young Greenwald WW, Matsui H, i2QTL Consortium, D'Antonio-Chronowska A, Stegle O, Smith EN, Montgomery SB, DeBoever C, Frazer KA. PMID: 32522982; PMCID: PMC7286898.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansCells
    25. Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats. Nat Commun. 2020 06 10; 11(1):2928. Jakubosky D, Smith EN, D'Antonio M, Jan Bonder M, Young Greenwald WW, D'Antonio-Chronowska A, Matsui H, i2QTL Consortium, Stegle O, Montgomery SB, DeBoever C, Frazer KA. PMID: 32522985; PMCID: PMC7287045.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    26. Genomic integrity of human induced pluripotent stem cells across nine studies in the NHLBI NextGen program. Stem Cell Res. 2020 07; 46:101803. Kanchan K, Iyer K, Yanek LR, Carcamo-Orive I, Taub MA, Malley C, Baldwin K, Becker LC, Broeckel U, Cheng L, Cowan C, D'Antonio M, Frazer KA, Quertermous T, Mostoslavsky G, Murphy G, Rabinovitch M, Rader DJ, Steinberg MH, Topol E, Yang W, Knowles JW, Jaquish CE, Ruczinski I, Mathias RA. PMID: 32442913; PMCID: PMC7575060.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    27. Author Correction: Longitudinal assessment of tumor development using cancer avatars derived from genetically engineered pluripotent stem cells. Nat Commun. 2020 04 20; 11(1):1958. Koga T, Chaim IA, Benitez JA, Markmiller S, Parisian AD, Hevner RF, Turner KM, Hessenauer FM, D'Antonio M, Nguyen ND, Saberi S, Ma J, Miki S, Boyer AD, Ravits J, Frazer KA, Bafna V, Chen CC, Mischel PS, Yeo GW, Furnari FB. PMID: 32312984; PMCID: PMC7171109.
      View in: PubMed   Mentions: 1     Fields:    
    28. Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants. Nat Commun. 2020 02 19; 11(1):955. Donovan MKR, D'Antonio-Chronowska A, D'Antonio M, Frazer KA. PMID: 32075962; PMCID: PMC7031340.
      View in: PubMed   Mentions: 63     Fields:    Translation:HumansAnimalsCells
    29. Longitudinal assessment of tumor development using cancer avatars derived from genetically engineered pluripotent stem cells. Nat Commun. 2020 Jan 28; 11(1):550. Koga T, Chaim IA, Benitez JA, Markmiller S, Parisian AD, Hevner RF, Turner KM, Hessenauer FM, D'Antonio M, Nguyen ND, Saberi S, Ma J, Miki S, Boyer AD, Ravits J, Frazer KA, Bafna V, Chen CC, Mischel PS, Yeo GW, Furnari FB. PMID: 31992716; PMCID: PMC6987220.
      View in: PubMed   Mentions: 32     Fields:    Translation:HumansAnimalsCells
    30. In vitro Differentiation of Human iPSC-derived Retinal Pigment Epithelium Cells (iPSC-RPE). Bio Protoc. 2019 Dec 20; 9(24):e3469. D'Antonio-Chronowska A, D'Antonio M, Frazer KA. PMID: 33654959; PMCID: PMC7853967.
      View in: PubMed   Mentions: 5  
    31. Systematic genetic analysis of the MHC region reveals mechanistic underpinnings of HLA type associations with disease. Elife. 2019 11 20; 8. D'Antonio M, Reyna J, Jakubosky D, Donovan MK, Bonder MJ, Matsui H, Stegle O, Nariai N, D'Antonio-Chronowska A, Frazer KA. PMID: 31746734; PMCID: PMC6904215.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    32. Genomic and transcriptomic association studies identify 16 novel susceptibility loci for venous thromboembolism. Blood. 2019 11 07; 134(19):1645-1657. Lindström S, Wang L, Smith EN, Gordon W, van Hylckama Vlieg A, de Andrade M, Brody JA, Pattee JW, Haessler J, Brumpton BM, Chasman DI, Suchon P, Chen MH, Turman C, Germain M, Wiggins KL, MacDonald J, Braekkan SK, Armasu SM, Pankratz N, Jackson RD, Nielsen JB, Giulianini F, Puurunen MK, Ibrahim M, Heckbert SR, Damrauer SM, Natarajan P, Klarin D, Million Veteran Program, de Vries PS, Sabater-Lleal M, Huffman JE, CHARGE Hemostasis Working Group, Bammler TK, Frazer KA, McCauley BM, Taylor K, Pankow JS, Reiner AP, Gabrielsen ME, Deleuze JF, O'Donnell CJ, Kim J, McKnight B, Kraft P, Hansen JB, Rosendaal FR, Heit JA, Psaty BM, Tang W, Kooperberg C, Hveem K, Ridker PM, Morange PE, Johnson AD, Kabrhel C, Trégouët DA, Smith NL. PMID: 31420334; PMCID: PMC6871304.
      View in: PubMed   Mentions: 91     Fields:    Translation:Humans
    33. A Network of microRNAs Acts to Promote Cell Cycle Exit and Differentiation of Human Pancreatic Endocrine Cells. iScience. 2019 Nov 22; 21:681-694. Jin W, Mulas F, Gaertner B, Sui Y, Wang J, Matta I, Zeng C, Vinckier N, Wang A, Nguyen-Ngoc KV, Chiou J, Kaestner KH, Frazer KA, Carrano AC, Shih HP, Sander M. PMID: 31733514; PMCID: PMC6889369.
      View in: PubMed   Mentions: 15  
    34. Association of Human iPSC Gene Signatures and X Chromosome Dosage with Two Distinct Cardiac Differentiation Trajectories. Stem Cell Reports. 2019 11 12; 13(5):924-938. D'Antonio-Chronowska A, Donovan MKR, Young Greenwald WW, Nguyen JP, Fujita K, Hashem S, Matsui H, Soncin F, Parast M, Ward MC, Coulet F, Smith EN, Adler E, D'Antonio M, Frazer KA. PMID: 31668852; PMCID: PMC6895695.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    35. Fibrinogen gamma gene rs2066865 and risk of cancer-related venous thromboembolism. Haematologica. 2020 07; 105(7):1963-1968. Paulsen B, Skille H, Smith EN, Hveem K, Gabrielsen ME, Brækkan SK, Rosendaal FR, Frazer KA, Gran OV, Hansen JB. PMID: 31582554; PMCID: PMC7327659.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    36. Allele-specific NKX2-5 binding underlies multiple genetic associations with human electrocardiographic traits. Nat Genet. 2019 10; 51(10):1506-1517. Benaglio P, D'Antonio-Chronowska A, Ma W, Yang F, Young Greenwald WW, Donovan MKR, DeBoever C, Li H, Drees F, Singhal S, Matsui H, van Setten J, Sotoodehnia N, Gaulton KJ, Smith EN, D'Antonio M, Rosenfeld MG, Frazer KA. PMID: 31570892; PMCID: PMC6858543.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    37. Mutations in topoisomerase IIβ result in a B cell immunodeficiency. Nat Commun. 2019 08 13; 10(1):3644. Broderick L, Yost S, Li D, McGeough MD, Booshehri LM, Guaderrama M, Brydges SD, Kucharova K, Patel NC, Harr M, Hakonarson H, Zackai E, Cowell IG, Austin CA, Hügle B, Gebauer C, Zhang J, Xu X, Wang J, Croker BA, Frazer KA, Putnam CD, Hoffman HM. PMID: 31409799; PMCID: PMC6692411.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansAnimalsCells
    38. Human iPSC-Derived Retinal Pigment Epithelium: A Model System for Prioritizing and Functionally Characterizing Causal Variants at AMD Risk Loci. Stem Cell Reports. 2019 06 11; 12(6):1342-1353. Smith EN, D'Antonio-Chronowska A, Greenwald WW, Borja V, Aguiar LR, Pogue R, Matsui H, Benaglio P, Borooah S, D'Antonio M, Ayyagari R, Frazer KA. PMID: 31080113; PMCID: PMC6565613.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    39. Pancreatic islet chromatin accessibility and conformation reveals distal enhancer networks of type 2 diabetes risk. Nat Commun. 2019 05 07; 10(1):2078. Greenwald WW, Chiou J, Yan J, Qiu Y, Dai N, Wang A, Nariai N, Aylward A, Han JY, Kadakia N, Regue L, Okino ML, Drees F, Kramer D, Vinckier N, Minichiello L, Gorkin D, Avruch J, Frazer KA, Sander M, Ren B, Gaulton KJ. PMID: 31064983; PMCID: PMC6505525.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansAnimalsCells
    40. Activation of hedgehog signaling associates with early disease progression in chronic lymphocytic leukemia. Blood. 2019 06 20; 133(25):2651-2663. Ghia EM, Rassenti LZ, Neuberg DS, Blanco A, Yousif F, Smith EN, McPherson JD, Hudson TJ, HALT Pan-Leukemia Gene Panel Consortium, Harismendy O, Frazer KA, Kipps TJ. PMID: 30923040; PMCID: PMC6587306.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    41. Effect of prothrombotic genotypes on the risk of venous thromboembolism in patients with and without ischemic stroke. The Tromsø Study. J Thromb Haemost. 2019 05; 17(5):749-758. Rinde LB, Morelli VM, Småbrekke B, Mathiesen EB, Løchen ML, Njølstad I, Wilsgaard T, Smith E, Rosendaal FR, Frazer KA, Braekkan SK, Hansen JB. PMID: 30773804.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    42. Subtle changes in chromatin loop contact propensity are associated with differential gene regulation and expression. Nat Commun. 2019 03 05; 10(1):1054. Greenwald WW, Li H, Benaglio P, Jakubosky D, Matsui H, Schmitt A, Selvaraj S, D'Antonio M, D'Antonio-Chronowska A, Smith EN, Frazer KA. PMID: 30837461; PMCID: PMC6401380.
      View in: PubMed   Mentions: 53     Fields:    Translation:HumansCells
    43. A large-scale exome array analysis of venous thromboembolism. Genet Epidemiol. 2019 06; 43(4):449-457. Lindström S, Brody JA, Turman C, Germain M, Bartz TM, Smith EN, Chen MH, Puurunen M, Chasman D, Hassler J, Pankratz N, Basu S, Guan W, Gyorgy B, Ibrahim M, Empana JP, Olaso R, Jackson R, Braekkan SK, McKnight B, Deleuze JF, O'Donnell CJ, Jouven X, Frazer KA, Psaty BM, Wiggins KL, Taylor K, Reiner AP, Heckbert SR, Kooperberg C, Ridker P, Hansen JB, Tang W, Johnson AD, Morange PE, Trégouët DA, Kraft P, Smith NL, Kabrhel C, INVENT Consortium. PMID: 30659681; PMCID: PMC6520188.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    44. Identification of Common and Rare Genetic Variation Associated With Plasma Protein Levels Using Whole-Exome Sequencing and Mass Spectrometry. Circ Genom Precis Med. 2018 12; 11(12):e002170. Solomon T, Lapek JD, Jensen SB, Greenwald WW, Hindberg K, Matsui H, Latysheva N, Braekken SK, Gonzalez DJ, Frazer KA, Smith EN, Hansen JB. PMID: 30562114; PMCID: PMC6301071.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    45. Cell-Surface Marker Signature for Enrichment of Ventricular Cardiomyocytes Derived from Human Embryonic Stem Cells. Stem Cell Reports. 2018 09 11; 11(3):828-841. Veevers J, Farah EN, Corselli M, Witty AD, Palomares K, Vidal JG, Emre N, Carson CT, Ouyang K, Liu C, van Vliet P, Zhu M, Hegarty JM, Deacon DC, Grinstein JD, Dirschinger RJ, Frazer KA, Adler ED, Knowlton KU, Chi NC, Martin JC, Chen J, Evans SM. PMID: 30122443; PMCID: PMC6135222.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    46. Discovery of novel plasma biomarkers for future incident venous thromboembolism by untargeted synchronous precursor selection mass spectrometry proteomics. J Thromb Haemost. 2018 09; 16(9):1763-1774. Jensen SB, Hindberg K, Solomon T, Smith EN, Lapek JD, Gonzalez DJ, Latysheva N, Frazer KA, Braekkan SK, Hansen JB. PMID: 29964323; PMCID: PMC6123273.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    47. Insights into the Mutational Burden of Human Induced Pluripotent Stem Cells from an Integrative Multi-Omics Approach. Cell Rep. 2018 07 24; 24(4):883-894. D'Antonio M, Benaglio P, Jakubosky D, Greenwald WW, Matsui H, Donovan MKR, Li H, Smith EN, D'Antonio-Chronowska A, Frazer KA. PMID: 30044985; PMCID: PMC6467479.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansCells
    48. IFT88 mutations identified in individuals with non-syndromic recessive retinal degeneration result in abnormal ciliogenesis. Hum Genet. 2018 Jul; 137(6-7):447-458. Chekuri A, Guru AA, Biswas P, Branham K, Borooah S, Soto-Hermida A, Hicks M, Khan NW, Matsui H, Alapati A, Raghavendra PB, Roosing S, Sarangapani S, Mathavan S, Telenti A, Heckenlively JR, Riazuddin SA, Frazer KA, Sieving PA, Ayyagari R. PMID: 29978320; PMCID: PMC6150774.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    49. Publisher Correction: PTEN regulates glioblastoma oncogenesis through chromatin-associated complexes of DAXX and histone H3.3. Nat Commun. 2018 05 25; 9:16217. Benitez JA, Ma J, D'Antonio M, Boyer A, Camargo MF, Zanca C, Kelly S, Khodadadi-Jamayran A, Jameson NM, Andersen M, Miletic H, Saberi S, Frazer KA, Cavenee WK, Furnari FB. PMID: 29799523; PMCID: PMC6026911.
      View in: PubMed   Mentions: 1     Fields:    
    50. A mutation in IFT43 causes non-syndromic recessive retinal degeneration. Hum Mol Genet. 2017 12 01; 26(23):4741-4751. Biswas P, Duncan JL, Ali M, Matsui H, Naeem MA, Raghavendra PB, Frazer KA, Arts HH, Riazuddin S, Akram J, Hejtmancik JF, Riazuddin SA, Ayyagari R. PMID: 28973684; PMCID: PMC6075558.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    51. Joint effects of prothrombotic genotypes and body height on the risk of venous thromboembolism: the Tromsø study. J Thromb Haemost. 2018 01; 16(1):83-89. Horvei LD, Braekkan SK, Smith EN, Solomon T, Hindberg K, Frazer KA, Rosendaal FR, Hansen JB. PMID: 29094466.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    52. Efficient Prioritization of Multiple Causal eQTL Variants via Sparse Polygenic Modeling. Genetics. 2017 12; 207(4):1301-1312. Nariai N, Greenwald WW, DeBoever C, Li H, Frazer KA. PMID: 29074555; PMCID: PMC5714449.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    53. Correction: Gustafson et al., Whole Genome Sequencing Revealed Mutations in Two Independent Genes as the Underlying Cause of Retinal Degeneration in an Ashkenazi Jewish Pedigree. Genes 2017, 8, 210. Genes (Basel). 2017 10 23; 8(10). Gustafson K, Duncan JL, Biswas P, Soto-Hermida A, Matsui H, Jakubosky D, Suk J, Telenti A, Frazer KA, Ayyagari R. PMID: 29065517; PMCID: PMC5664136.
      View in: PubMed   Mentions: 2     Fields:    
    54. Identifying DNase I hypersensitive sites as driver distal regulatory elements in breast cancer. Nat Commun. 2017 09 05; 8(1):436. D Antonio M, Weghorn D, D Antonio-Chronowska A, Coulet F, Olson KM, DeBoever C, Drees F, Arias A, Alakus H, Richardson AL, Schwab RB, Farley EK, Sunyaev SR, Frazer KA. PMID: 28874753; PMCID: PMC5585396.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    55. Whole Genome Sequencing Revealed Mutations in Two Independent Genes as the Underlying Cause of Retinal Degeneration in an Ashkenazi Jewish Pedigree. Genes (Basel). 2017 08 24; 8(9). Gustafson K, Duncan JL, Biswas P, Soto-Hermida A, Matsui H, Jakubosky D, Suk J, Telenti A, Frazer KA, Ayyagari R. PMID: 28837078; PMCID: PMC5615344.
      View in: PubMed   Mentions: 7     Fields:    
    56. Glioblastoma cellular cross-talk converges on NF-κB to attenuate EGFR inhibitor sensitivity. Genes Dev. 2017 06 15; 31(12):1212-1227. Zanca C, Villa GR, Benitez JA, Thorne AH, Koga T, D'Antonio M, Ikegami S, Ma J, Boyer AD, Banisadr A, Jameson NM, Parisian AD, Eliseeva OV, Barnabe GF, Liu F, Wu S, Yang H, Wykosky J, Frazer KA, Verkhusha VV, Isaguliants MG, Weiss WA, Gahman TC, Shiau AK, Chen CC, Mischel PS, Cavenee WK, Furnari FB. PMID: 28724615; PMCID: PMC5558924.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansAnimalsCells
    57. PTEN regulates glioblastoma oncogenesis through chromatin-associated complexes of DAXX and histone H3.3. Nat Commun. 2017 05 12; 8:15223. Benitez JA, Ma J, D'Antonio M, Boyer A, Camargo MF, Zanca C, Kelly S, Khodadadi-Jamayran A, Jameson NM, Andersen M, Miletic H, Saberi S, Frazer KA, Cavenee WK, Furnari FB. PMID: 28497778; PMCID: PMC5437297.
      View in: PubMed   Mentions: 65     Fields:    Translation:HumansAnimalsCells
    58. iPSCORE: A Resource of 222 iPSC Lines Enabling Functional Characterization of Genetic Variation across a Variety of Cell Types. Stem Cell Reports. 2017 04 11; 8(4):1086-1100. Panopoulos AD, D'Antonio M, Benaglio P, Williams R, Hashem SI, Schuldt BM, DeBoever C, Arias AD, Garcia M, Nelson BC, Harismendy O, Jakubosky DA, Donovan MKR, Greenwald WW, Farnam K, Cook M, Borja V, Miller CA, Grinstein JD, Drees F, Okubo J, Diffenderfer KE, Hishida Y, Modesto V, Dargitz CT, Feiring R, Zhao C, Aguirre A, McGarry TJ, Matsui H, Li H, Reyna J, Rao F, O'Connor DT, Yeo GW, Evans SM, Chi NC, Jepsen K, Nariai N, Müller FJ, Goldstein LSB, Izpisua Belmonte JC, Adler E, Loring JF, Berggren WT, D'Antonio-Chronowska A, Smith EN, Frazer KA. PMID: 28410642; PMCID: PMC5390244.
      View in: PubMed   Mentions: 71     Fields:    Translation:HumansCells
    59. High-Throughput and Cost-Effective Characterization of Induced Pluripotent Stem Cells. Stem Cell Reports. 2017 04 11; 8(4):1101-1111. D'Antonio M, Woodruff G, Nathanson JL, D'Antonio-Chronowska A, Arias A, Matsui H, Williams R, Herrera C, Reyna SM, Yeo GW, Goldstein LSB, Panopoulos AD, Frazer KA. PMID: 28410643; PMCID: PMC5390243.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    60. Pgltools: a genomic arithmetic tool suite for manipulation of Hi-C peak and other chromatin interaction data. BMC Bioinformatics. 2017 Apr 07; 18(1):207. Greenwald WW, Li H, Smith EN, Benaglio P, Nariai N, Frazer KA. PMID: 28388874; PMCID: PMC5384132.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    61. Aberrant DNA Methylation in Human iPSCs Associates with MYC-Binding Motifs in a Clone-Specific Manner Independent of Genetics. Cell Stem Cell. 2017 04 06; 20(4):505-517.e6. Panopoulos AD, Smith EN, Arias AD, Shepard PJ, Hishida Y, Modesto V, Diffenderfer KE, Conner C, Biggs W, Sandoval E, D'Antonio-Chronowska A, Berggren WT, Izpisua Belmonte JC, Frazer KA. PMID: 28388429; PMCID: PMC5444384.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    62. Large-Scale Profiling Reveals the Influence of Genetic Variation on Gene Expression in Human Induced Pluripotent Stem Cells. Cell Stem Cell. 2017 04 06; 20(4):533-546.e7. DeBoever C, Li H, Jakubosky D, Benaglio P, Reyna J, Olson KM, Huang H, Biggs W, Sandoval E, D'Antonio M, Jepsen K, Matsui H, Arias A, Ren B, Nariai N, Smith EN, D'Antonio-Chronowska A, Farley EK, Frazer KA. PMID: 28388430; PMCID: PMC5444918.
      View in: PubMed   Mentions: 79     Fields:    Translation:HumansCells
    63. Corrigendum: PI3Kγ is a molecular switch that controls immune suppression. Nature. 2017 02 02; 542(7639):124. Kaneda MM, Messer KS, Ralainirina N, Li H, Leem CJ, Gorjestani S, Woo G, Nguyen AV, Figueiredo CC, Foubert P, Schmid MC, Pink M, Winkler DG, Rausch M, Palombella VJ, Kutok J, McGovern K, Frazer KA, Wu X, Karin M, Sasik R, Cohen EE, Varner JA. PMID: 27974794.
      View in: PubMed   Mentions: 17     Fields:    
    64. High-level ROR1 associates with accelerated disease progression in chronic lymphocytic leukemia. Blood. 2016 12 22; 128(25):2931-2940. Cui B, Ghia EM, Chen L, Rassenti LZ, DeBoever C, Widhopf GF, Yu J, Neuberg DS, Wierda WG, Rai KR, Kay NE, Brown JR, Jones JA, Gribben JG, Frazer KA, Kipps TJ. PMID: 27815263; PMCID: PMC5179332.
      View in: PubMed   Mentions: 70     Fields:    Translation:HumansCells
    65. Establishing the involvement of the novel gene AGBL5 in retinitis pigmentosa by whole genome sequencing. Physiol Genomics. 2016 12 01; 48(12):922-927. Branham K, Matsui H, Biswas P, Guru AA, Hicks M, Suk JJ, Li H, Jakubosky D, Long T, Telenti A, Nariai N, Heckenlively JR, Frazer KA, Sieving PA, Ayyagari R. PMID: 27764769; PMCID: PMC5206392.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    66. PI3Kγ is a molecular switch that controls immune suppression. Nature. 2016 11 17; 539(7629):437-442. Kaneda MM, Messer KS, Ralainirina N, Li H, Leem CJ, Gorjestani S, Woo G, Nguyen AV, Figueiredo CC, Foubert P, Schmid MC, Pink M, Winkler DG, Rausch M, Palombella VJ, Kutok J, McGovern K, Frazer KA, Wu X, Karin M, Sasik R, Cohen EE, Varner JA. PMID: 27642729; PMCID: PMC5479689.
      View in: PubMed   Mentions: 530     Fields:    Translation:HumansAnimalsCells
    67. Kataegis Expression Signature in Breast Cancer Is Associated with Late Onset, Better Prognosis, and Higher HER2 Levels. Cell Rep. 2016 07 19; 16(3):672-83. D'Antonio M, Tamayo P, Mesirov JP, Frazer KA. PMID: 27373164; PMCID: PMC4972030.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    68. Associations Between Common and Rare Exonic Genetic Variants and Serum Levels of 20 Cardiovascular-Related Proteins: The Tromsø Study. Circ Cardiovasc Genet. 2016 Aug; 9(4):375-83. Solomon T, Smith EN, Matsui H, Braekkan SK, INVENT Consortium, Wilsgaard T, Njølstad I, Mathiesen EB, Hansen JB, Frazer KA. PMID: 27329291; PMCID: PMC4982757.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    69. Joint effects of cancer and variants in the factor 5 gene on the risk of venous thromboembolism. Haematologica. 2016 09; 101(9):1046-53. Gran OV, Smith EN, Brækkan SK, Jensvoll H, Solomon T, Hindberg K, Wilsgaard T, Rosendaal FR, Frazer KA, Hansen JB. PMID: 27479824; PMCID: PMC5060021.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansPHPublic Health
    70. ADAR1 Activation Drives Leukemia Stem Cell Self-Renewal by Impairing Let-7 Biogenesis. Cell Stem Cell. 2016 08 04; 19(2):177-191. Zipeto MA, Court AC, Sadarangani A, Delos Santos NP, Balaian L, Chun HJ, Pineda G, Morris SR, Mason CN, Geron I, Barrett C, Goff DJ, Wall R, Pellecchia M, Minden M, Frazer KA, Marra MA, Crews LA, Jiang Q, Jamieson CHM. PMID: 27292188; PMCID: PMC4975616.
      View in: PubMed   Mentions: 126     Fields:    Translation:AnimalsCells
    71. A scientist's guide for submitting data to ZFIN. Methods Cell Biol. 2016; 135:451-81. Howe DG, Bradford YM, Eagle A, Fashena D, Frazer K, Kalita P, Mani P, Martin R, Moxon ST, Paddock H, Pich C, Ramachandran S, Ruzicka L, Schaper K, Shao X, Singer A, Toro S, Van Slyke C, Westerfield M. PMID: 27443940; PMCID: PMC6319372.
      View in: PubMed   Mentions: 7     Fields:    Translation:Animals
    72. Reversion to an embryonic alternative splicing program enhances leukemia stem cell self-renewal. Proc Natl Acad Sci U S A. 2015 Dec 15; 112(50):15444-9. Holm F, Hellqvist E, Mason CN, Ali SA, Delos-Santos N, Barrett CL, Chun HJ, Minden MD, Moore RA, Marra MA, Runza V, Frazer KA, Sadarangani A, Jamieson CH. PMID: 26621726; PMCID: PMC4687548.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    73. Mutational Profiling Can Establish Clonal or Independent Origin in Synchronous Bilateral Breast and Other Tumors. PLoS One. 2015; 10(11):e0142487. Bao L, Messer K, Schwab R, Harismendy O, Pu M, Crain B, Yost S, Frazer KA, Rana B, Hasteh F, Wallace A, Parker BA. PMID: 26554380; PMCID: PMC4640562.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    74. Systematic transcriptome analysis reveals tumor-specific isoforms for ovarian cancer diagnosis and therapy. Proc Natl Acad Sci U S A. 2015 Jun 09; 112(23):E3050-7. Barrett CL, DeBoever C, Jepsen K, Saenz CC, Carson DA, Frazer KA. PMID: 26015570; PMCID: PMC4466751.
      View in: PubMed   Mentions: 42     Fields:    Translation:HumansCells
    75. Brief Report: Oxidative Stress Mediates Cardiomyocyte Apoptosis in a Human Model of Danon Disease and Heart Failure. Stem Cells. 2015 Jul; 33(7):2343-50. Hashem SI, Perry CN, Bauer M, Han S, Clegg SD, Ouyang K, Deacon DC, Spinharney M, Panopoulos AD, Izpisua Belmonte JC, Frazer KA, Chen J, Gong Q, Zhou Z, Chi NC, Adler ED. PMID: 25826782; PMCID: PMC4651661.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansCells
    76. BAP1 mutation is a frequent somatic event in peritoneal malignant mesothelioma. J Transl Med. 2015 Apr 16; 13:122. Alakus H, Yost SE, Woo B, French R, Lin GY, Jepsen K, Frazer KA, Lowy AM, Harismendy O. PMID: 25889843; PMCID: PMC4422481.
      View in: PubMed   Mentions: 28     Fields:    Translation:Humans
    77. Genetic and epigenetic profiling of CLL disease progression reveals limited somatic evolution and suggests a relationship to memory-cell development. Blood Cancer J. 2015 Apr 10; 5:e303. Smith EN, Ghia EM, DeBoever CM, Rassenti LZ, Jepsen K, Yoon KA, Matsui H, Rozenzhak S, Alakus H, Shepard PJ, Dai Y, Khosroheidari M, Bina M, Gunderson KL, Messer K, Muthuswamy L, Hudson TJ, Harismendy O, Barrett CL, Jamieson CH, Carson DA, Kipps TJ, Frazer KA. PMID: 25860294; PMCID: PMC4450323.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    78. Transcriptome sequencing reveals potential mechanism of cryptic 3' splice site selection in SF3B1-mutated cancers. PLoS Comput Biol. 2015 Mar; 11(3):e1004105. DeBoever C, Ghia EM, Shepard PJ, Rassenti L, Barrett CL, Jepsen K, Jamieson CH, Carson D, Kipps TJ, Frazer KA. PMID: 25768983; PMCID: PMC4358997.
      View in: PubMed   Mentions: 131     Fields:    Translation:HumansCells
    79. An RNA editing fingerprint of cancer stem cell reprogramming. J Transl Med. 2015 Feb 12; 13:52. Crews LA, Jiang Q, Zipeto MA, Lazzari E, Court AC, Ali S, Barrett CL, Frazer KA, Jamieson CH. PMID: 25889244; PMCID: PMC4341880.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansCells
    80. Consanguinity and rare mutations outside of MCCC genes underlie nonspecific phenotypes of MCCD. Genet Med. 2015 Aug; 17(8):660-7. Shepard PJ, Barshop BA, Baumgartner MR, Hansen JB, Jepsen K, Smith EN, Frazer KA. PMID: 25356967; PMCID: PMC4422778.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansPHPublic Health
    81. Biased estimates of clonal evolution and subclonal heterogeneity can arise from PCR duplicates in deep sequencing experiments. Genome Biol. 2014 Aug 07; 15(8):420. Smith EN, Jepsen K, Khosroheidari M, Rassenti LZ, D'Antonio M, Ghia EM, Carson DA, Jamieson CH, Kipps TJ, Frazer KA. PMID: 25103687; PMCID: PMC4165357.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    82. Correction: Genome-wide mutational landscape of mucinous carcinomatosis peritonei of appendiceal origin. Genome Med. 2014; 6(7):53. Alakus H, Babicky ML, Ghosh P, Yost S, Jepsen K, Dai Y, Arias A, Samuels ML, Mose ES, Schwab RB, Peterson MR, Lowy AM, Frazer KA, Harismendy O. PMID: 25228923; PMCID: PMC4165363.
      View in: PubMed   Mentions: 1     Fields:    
    83. Network-based analysis identifies epigenetic biomarkers of esophageal squamous cell carcinoma progression. Bioinformatics. 2014 Nov 01; 30(21):3054-61. Cheng CP, Kuo IY, Alakus H, Frazer KA, Harismendy O, Wang YC, Tseng VS. PMID: 25015989; PMCID: PMC4609006.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    84. Homozygous GNAS 393C-allele carriers with locally advanced esophageal cancer fail to benefit from platinum-based preoperative chemoradiotherapy. Ann Surg Oncol. 2014 Dec; 21(13):4375-82. Alakus H, Bollschweiler E, Hölscher AH, Warnecke-Eberz U, Frazer KA, Harismendy O, Lowy AM, Mönig SP, Eberz PM, Maus M, Drebber U, Siffert W, Metzger R. PMID: 24986238.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    85. MiningABs: mining associated biomarkers across multi-connected gene expression datasets. BMC Bioinformatics. 2014 Jun 08; 15:173. Cheng CP, DeBoever C, Frazer KA, Liu YC, Tseng VS. PMID: 24909518; PMCID: PMC4068973.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    86. Genome-wide mutational landscape of mucinous carcinomatosis peritonei of appendiceal origin. Genome Med. 2014; 6(5):43. Alakus H, Babicky ML, Ghosh P, Yost S, Jepsen K, Dai Y, Arias A, Samuels ML, Mose ES, Schwab RB, Peterson MR, Lowy AM, Frazer KA, Harismendy O. PMID: 24944587; PMCID: PMC4062050.
      View in: PubMed   Mentions: 46     Fields:    
    87. Effective filtering strategies to improve data quality from population-based whole exome sequencing studies. BMC Bioinformatics. 2014 May 02; 15:125. Carson AR, Smith EN, Matsui H, Brækkan SK, Jepsen K, Hansen JB, Frazer KA. PMID: 24884706; PMCID: PMC4098776.
      View in: PubMed   Mentions: 67     Fields:    Translation:Humans
    88. miR-150 influences B-cell receptor signaling in chronic lymphocytic leukemia by regulating expression of GAB1 and FOXP1. Blood. 2014 Jul 03; 124(1):84-95. Mraz M, Chen L, Rassenti LZ, Ghia EM, Li H, Jepsen K, Smith EN, Messer K, Frazer KA, Kipps TJ. PMID: 24787006; PMCID: PMC4125356.
      View in: PubMed   Mentions: 73     Fields:    Translation:HumansCells
    89. Whole genome sequencing of Ethiopian highlanders reveals conserved hypoxia tolerance genes. Genome Biol. 2014 Feb 20; 15(2):R36. Udpa N, Ronen R, Zhou D, Liang J, Stobdan T, Appenzeller O, Yin Y, Du Y, Guo L, Cao R, Wang Y, Jin X, Huang C, Jia W, Cao D, Guo G, Claydon VE, Hainsworth R, Gamboa JL, Zibenigus M, Zenebe G, Xue J, Liu S, Frazer KA, Li Y, Bafna V, Haddad GG. PMID: 24555826; PMCID: PMC4054780.
      View in: PubMed   Mentions: 41     Fields:    Translation:HumansAnimalsCells
    90. Genetic ancestry of participants in the National Children's Study. Genome Biol. 2014 Feb 03; 15(2):R22. Smith EN, Jepsen K, Arias AD, Shepard PJ, Chambers CD, Frazer KA. PMID: 24490717; PMCID: PMC4053981.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    91. Evaluation of ultra-deep targeted sequencing for personalized breast cancer care. Breast Cancer Res. 2013 Dec 10; 15(6):R115. Harismendy O, Schwab RB, Alakus H, Yost SE, Matsui H, Hasteh F, Wallace AM, Park HL, Madlensky L, Parker B, Carpenter PM, Jepsen K, Anton-Culver H, Frazer KA. PMID: 24326041; PMCID: PMC3978701.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    92. Identification of liver cancer progenitors whose malignant progression depends on autocrine IL-6 signaling. Cell. 2013 Oct 10; 155(2):384-96. He G, Dhar D, Nakagawa H, Font-Burgada J, Ogata H, Jiang Y, Shalapour S, Seki E, Yost SE, Jepsen K, Frazer KA, Harismendy O, Hatziapostolou M, Iliopoulos D, Suetsugu A, Hoffman RM, Tateishi R, Koike K, Karin M. PMID: 24120137; PMCID: PMC4015514.
      View in: PubMed   Mentions: 227     Fields:    Translation:AnimalsCells
    93. Whole transcriptome sequencing enables discovery and analysis of viruses in archived primary central nervous system lymphomas. PLoS One. 2013; 8(9):e73956. DeBoever C, Reid EG, Smith EN, Wang X, Dumaop W, Harismendy O, Carson D, Richman D, Masliah E, Frazer KA. PMID: 24023918; PMCID: PMC3762708.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    94. Whole-genome sequencing uncovers the genetic basis of chronic mountain sickness in Andean highlanders. Am J Hum Genet. 2013 Sep 05; 93(3):452-62. Zhou D, Udpa N, Ronen R, Stobdan T, Liang J, Appenzeller O, Zhao HW, Yin Y, Du Y, Guo L, Cao R, Wang Y, Jin X, Huang C, Jia W, Cao D, Guo G, Gamboa JL, Villafuerte F, Callacondo D, Xue J, Liu S, Frazer KA, Li Y, Bafna V, Haddad GG. PMID: 23954164; PMCID: PMC3769925.
      View in: PubMed   Mentions: 63     Fields:    Translation:HumansAnimalsCells
    95. Mutascope: sensitive detection of somatic mutations from deep amplicon sequencing. Bioinformatics. 2013 Aug 01; 29(15):1908-9. Yost SE, Alakus H, Matsui H, Schwab RB, Jepsen K, Frazer KA, Harismendy O. PMID: 23712659; PMCID: PMC3712217.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    96. Transcriptome sequencing of tumor subpopulations reveals a spectrum of therapeutic options for squamous cell lung cancer. PLoS One. 2013; 8(3):e58714. Barrett CL, Schwab RB, Jung H, Crain B, Goff DJ, Jamieson CH, Thistlethwaite PA, Harismendy O, Carson DA, Frazer KA. PMID: 23527012; PMCID: PMC3604164.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    97. High-resolution mutational profiling suggests the genetic validity of glioblastoma patient-derived pre-clinical models. PLoS One. 2013; 8(2):e56185. Yost SE, Pastorino S, Rozenzhak S, Smith EN, Chao YS, Jiang P, Kesari S, Frazer KA, Harismendy O. PMID: 23441165; PMCID: PMC3575368.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansAnimals
    98. A Pan-BCL2 inhibitor renders bone-marrow-resident human leukemia stem cells sensitive to tyrosine kinase inhibition. Cell Stem Cell. 2013 Mar 07; 12(3):316-28. Goff DJ, Court Recart A, Sadarangani A, Chun HJ, Barrett CL, Krajewska M, Leu H, Low-Marchelli J, Ma W, Shih AY, Wei J, Zhai D, Geron I, Pu M, Bao L, Chuang R, Balaian L, Gotlib J, Minden M, Martinelli G, Rusert J, Dao KH, Shazand K, Wentworth P, Smith KM, Jamieson CA, Morris SR, Messer K, Goldstein LS, Hudson TJ, Marra M, Frazer KA, Pellecchia M, Reed JC, Jamieson CH. PMID: 23333150; PMCID: PMC3968867.
      View in: PubMed   Mentions: 107     Fields:    Translation:HumansCells
    99. Implementing genomic medicine in the clinic: the future is here. Genet Med. 2013 Apr; 15(4):258-67. Manolio TA, Chisholm RL, Ozenberger B, Roden DM, Williams MS, Wilson R, Bick D, Bottinger EP, Brilliant MH, Eng C, Frazer KA, Korf B, Ledbetter DH, Lupski JR, Marsh C, Mrazek D, Murray MF, O'Donnell PH, Rader DJ, Relling MV, Shuldiner AR, Valle D, Weinshilboum R, Green ED, Ginsburg GS. PMID: 23306799; PMCID: PMC3835144.
      View in: PubMed   Mentions: 247     Fields:    Translation:Humans
    100. ADAR1 promotes malignant progenitor reprogramming in chronic myeloid leukemia. Proc Natl Acad Sci U S A. 2013 Jan 15; 110(3):1041-6. Jiang Q, Crews LA, Barrett CL, Chun HJ, Court AC, Isquith JM, Zipeto MA, Goff DJ, Minden M, Sadarangani A, Rusert JM, Dao KH, Morris SR, Goldstein LS, Marra MA, Frazer KA, Jamieson CH. PMID: 23275297; PMCID: PMC3549099.
      View in: PubMed   Mentions: 98     Fields:    Translation:HumansAnimalsCells
    101. Decoding the human genome. Genome Res. 2012 Sep; 22(9):1599-601. Frazer KA. PMID: 22955971; PMCID: PMC3431476.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    102. Identification of high-confidence somatic mutations in whole genome sequence of formalin-fixed breast cancer specimens. Nucleic Acids Res. 2012 Aug; 40(14):e107. Yost SE, Smith EN, Schwab RB, Bao L, Jung H, Wang X, Voest E, Pierce JP, Messer K, Parker BA, Harismendy O, Frazer KA. PMID: 22492626; PMCID: PMC3413110.
      View in: PubMed   Mentions: 47     Fields:    Translation:Humans
    103. Detection of low prevalence somatic mutations in solid tumors with ultra-deep targeted sequencing. Genome Biol. 2011 Dec 20; 12(12):R124. Harismendy O, Schwab RB, Bao L, Olson J, Rozenzhak S, Kotsopoulos SK, Pond S, Crain B, Chee MS, Messer K, Link DR, Frazer KA. PMID: 22185227; PMCID: PMC3334619.
      View in: PubMed   Mentions: 44     Fields:    Translation:HumansAnimals
    104. Sensitive gene fusion detection using ambiguously mapping RNA-Seq read pairs. Bioinformatics. 2011 Apr 15; 27(8):1068-75. Kinsella M, Harismendy O, Nakano M, Frazer KA, Bafna V. PMID: 21330288; PMCID: PMC3072550.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    105. 9p21 DNA variants associated with coronary artery disease impair interferon-γ signalling response. Nature. 2011 Feb 10; 470(7333):264-8. Harismendy O, Notani D, Song X, Rahim NG, Tanasa B, Heintzman N, Ren B, Fu XD, Topol EJ, Rosenfeld MG, Frazer KA. PMID: 21307941; PMCID: PMC3079517.
      View in: PubMed   Mentions: 312     Fields:    Translation:HumansCells
    106. Experimental selection of hypoxia-tolerant Drosophila melanogaster. Proc Natl Acad Sci U S A. 2011 Feb 08; 108(6):2349-54. Zhou D, Udpa N, Gersten M, Visk DW, Bashir A, Xue J, Frazer KA, Posakony JW, Subramaniam S, Bafna V, Haddad GG. PMID: 21262834; PMCID: PMC3038716.
      View in: PubMed   Mentions: 68     Fields:    Translation:AnimalsCells
    107. Population sequencing of two endocannabinoid metabolic genes identifies rare and common regulatory variants associated with extreme obesity and metabolite level. Genome Biol. 2010; 11(11):R118. Harismendy O, Bansal V, Bhatia G, Nakano M, Scott M, Wang X, Dib C, Turlotte E, Sipe JC, Murray SS, Deleuze JF, Bafna V, Topol EJ, Frazer KA. PMID: 21118518; PMCID: PMC3156957.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    108. A covering method for detecting genetic associations between rare variants and common phenotypes. PLoS Comput Biol. 2010 Oct 14; 6(10):e1000954. Bhatia G, Bansal V, Harismendy O, Schork NJ, Topol EJ, Frazer K, Bafna V. PMID: 20976246; PMCID: PMC2954823.
      View in: PubMed   Mentions: 58     Fields:    
    109. Fine mapping in 94 inbred mouse strains using a high-density haplotype resource. Genetics. 2010 Jul; 185(3):1081-95. Kirby A, Kang HM, Wade CM, Cotsapas C, Kostem E, Han B, Furlotte N, Kang EY, Rivas M, Bogue MA, Frazer KA, Johnson FM, Beilharz EJ, Cox DR, Eskin E, Daly MJ. PMID: 20439770; PMCID: PMC2907194.
      View in: PubMed   Mentions: 74     Fields:    Translation:HumansAnimals
    110. Accurate detection and genotyping of SNPs utilizing population sequencing data. Genome Res. 2010 Apr; 20(4):537-45. Bansal V, Harismendy O, Tewhey R, Murray SS, Schork NJ, Topol EJ, Frazer KA. PMID: 20150320; PMCID: PMC2847757.
      View in: PubMed   Mentions: 59     Fields:    Translation:HumansCells
    111. Microdroplet-based PCR enrichment for large-scale targeted sequencing. Nat Biotechnol. 2009 Nov; 27(11):1025-31. Tewhey R, Warner JB, Nakano M, Libby B, Medkova M, David PH, Kotsopoulos SK, Samuels ML, Hutchison JB, Larson JW, Topol EJ, Weiner MP, Harismendy O, Olson J, Link DR, Frazer KA. PMID: 19881494; PMCID: PMC2779736.
      View in: PubMed   Mentions: 165     Fields:    Translation:HumansCells
    112. Enrichment of sequencing targets from the human genome by solution hybridization. Genome Biol. 2009; 10(10):R116. Tewhey R, Nakano M, Wang X, Pabón-Peña C, Novak B, Giuffre A, Lin E, Happe S, Roberts DN, LeProust EM, Topol EJ, Harismendy O, Frazer KA. PMID: 19835619; PMCID: PMC2784331.
      View in: PubMed   Mentions: 61     Fields:    Translation:HumansCells
    113. Elucidating the role of 8q24 in colorectal cancer. Nat Genet. 2009 Aug; 41(8):868-9. Harismendy O, Frazer KA. PMID: 19639026.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    114. Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proc Natl Acad Sci U S A. 2009 Jul 28; 106(30):12273-8. McNally KL, Childs KL, Bohnert R, Davidson RM, Zhao K, Ulat VJ, Zeller G, Clark RM, Hoen DR, Bureau TE, Stokowski R, Ballinger DG, Frazer KA, Cox DR, Padhukasahasram B, Bustamante CD, Weigel D, Mackill DJ, Bruskiewich RM, Rätsch G, Buell CR, Leung H, Leach JE. PMID: 19597147; PMCID: PMC2718348.
      View in: PubMed   Mentions: 260     Fields:    Translation:AnimalsCells
    115. Common vs. rare allele hypotheses for complex diseases. Curr Opin Genet Dev. 2009 Jun; 19(3):212-9. Schork NJ, Murray SS, Frazer KA, Topol EJ. PMID: 19481926; PMCID: PMC2914559.
      View in: PubMed   Mentions: 316     Fields:    Translation:HumansCells
    116. Human genetic variation and its contribution to complex traits. Nat Rev Genet. 2009 Apr; 10(4):241-51. Frazer KA, Murray SS, Schork NJ, Topol EJ. PMID: 19293820.
      View in: PubMed   Mentions: 453     Fields:    Translation:HumansCells
    117. Evaluation of next generation sequencing platforms for population targeted sequencing studies. Genome Biol. 2009; 10(3):R32. Harismendy O, Ng PC, Strausberg RL, Wang X, Stockwell TB, Beeson KY, Schork NJ, Murray SS, Topol EJ, Levy S, Frazer KA. PMID: 19327155; PMCID: PMC2691003.
      View in: PubMed   Mentions: 268     Fields:    Translation:HumansCells
    118. Method for improving sequence coverage uniformity of targeted genomic intervals amplified by LR-PCR using Illumina GA sequencing-by-synthesis technology. Biotechniques. 2009 Mar; 46(3):229-31. Harismendy O, Frazer K. PMID: 19317667.
      View in: PubMed   Mentions: 31     Fields:    
    119. Genetic determinants of phenotypic diversity in humans. Genome Biol. 2008 Apr 24; 9(4):215. Rahim NG, Harismendy O, Topol EJ, Frazer KA. PMID: 18439327; PMCID: PMC2643926.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    120. Genome-wide scan identifies variation in MLXIPL associated with plasma triglycerides. Nat Genet. 2008 Feb; 40(2):149-51. Kooner JS, Chambers JC, Aguilar-Salinas CA, Hinds DA, Hyde CL, Warnes GR, Gómez Pérez FJ, Frazer KA, Elliott P, Scott J, Milos PM, Cox DR, Thompson JF. PMID: 18193046.
      View in: PubMed   Mentions: 157     Fields:    Translation:HumansCells
    121. A genome-wide approach to identifying novel-imprinted genes. Hum Genet. 2008 Jan; 122(6):625-34. Pollard KS, Serre D, Wang X, Tao H, Grundberg E, Hudson TJ, Clark AG, Frazer K. PMID: 17955261.
      View in: PubMed   Mentions: 37     Fields:    Translation:HumansCells
    122. Genome-wide detection and characterization of positive selection in human populations. Nature. 2007 Oct 18; 449(7164):913-8. Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, Cotsapas C, Xie X, Byrne EH, McCarroll SA, Gaudet R, Schaffner SF, Lander ES, International HapMap Consortium, Frazer KA, Ballinger DG, Cox DR, Hinds DA, Stuve LL, Gibbs RA, Belmont JW, Boudreau A, Hardenbol P, Leal SM, Pasternak S, Wheeler DA, Willis TD, Yu F, Yang H, Zeng C, Gao Y, Hu H, Hu W, Li C, Lin W, Liu S, Pan H, Tang X, Wang J, Wang W, Yu J, Zhang B, Zhang Q, Zhao H, Zhao H, Zhou J, Gabriel SB, Barry R, Blumenstiel B, Camargo A, Defelice M, Faggart M, Goyette M, Gupta S, Moore J, Nguyen H, Onofrio RC, Parkin M, Roy J, Stahl E, Winchester E, Ziaugra L, Altshuler D, Shen Y, Yao Z, Huang W, Chu X, He Y, Jin L, Liu Y, Shen Y, Sun W, Wang H, Wang Y, Wang Y, Xiong X, Xu L, Waye MM, Tsui SK, Xue H, Wong JT, Galver LM, Fan JB, Gunderson K, Murray SS, Oliphant AR, Chee MS, Montpetit A, Chagnon F, Ferretti V, Leboeuf M, Olivier JF, Phillips MS, Roumy S, Sallée C, Verner A, Hudson TJ, Kwok PY, Cai D, Koboldt DC, Miller RD, Pawlikowska L, Taillon-Miller P, Xiao M, Tsui LC, Mak W, Song YQ, Tam PK, Nakamura Y, Kawaguchi T, Kitamoto T, Morizono T, Nagashima A, Ohnishi Y, Sekine A, Tanaka T, Tsunoda T, Deloukas P, Bird CP, Delgado M, Dermitzakis ET, Gwilliam R, Hunt S, Morrison J, Powell D, Stranger BE, Whittaker P, Bentley DR, Daly MJ, de Bakker PI, Barrett J, Chretien YR, Maller J, McCarroll S, Patterson N, Pe'er I, Price A, Purcell S, Richter DJ, Sabeti P, Saxena R, Schaffner SF, Sham PC, Varilly P, Altshuler D, Stein LD, Krishnan L, Smith AV, Tello-Ruiz MK, Thorisson GA, Chakravarti A, Chen PE, Cutler DJ, Kashuk CS, Lin S, Abecasis GR, Guan W, Li Y, Munro HM, Qin ZS, Thomas DJ, McVean G, Auton A, Bottolo L, Cardin N, Eyheramendy S, Freeman C, Marchini J, Myers S, Spencer C, Stephens M, Donnelly P, Cardon LR, Clarke G, Evans DM, Morris AP, Weir BS, Tsunoda T, Johnson TA, Mullikin JC, Sherry ST, Feolo M, Skol A, Zhang H, Zeng C, Zhao H, Matsuda I, Fukushima Y, Macer DR, Suda E, Rotimi CN, Adebamowo CA, Ajayi I, Aniagwu T, Marshall PA, Nkwodimmah C, Royal CD, Leppert MF, Dixon M, Peiffer A, Qiu R, Kent A, Kato K, Niikawa N, Adewole IF, Knoppers BM, Foster MW, Clayton EW, Watkin J, Gibbs RA, Belmont JW, Muzny D, Nazareth L, Sodergren E, Weinstock GM, Wheeler DA, Yakub I, Gabriel SB, Onofrio RC, Richter DJ, Ziaugra L, Birren BW, Daly MJ, Altshuler D, Wilson RK, Fulton LL, Rogers J, Burton J, Carter NP, Clee CM, Griffiths M, Jones MC, McLay K, Plumb RW, Ross MT, Sims SK, Willey DL, Chen Z, Han H, Kang L, Godbout M, Wallenburg JC, L'Archevêque P, Bellemare G, Saeki K, Wang H, An D, Fu H, Li Q, Wang Z, Wang R, Holden AL, Brooks LD, McEwen JE, Guyer MS, Wang VO, Peterson JL, Shi M, Spiegel J, Sung LM, Zacharia LF, Collins FS, Kennedy K, Jamieson R, Stewart J. PMID: 17943131; PMCID: PMC2687721.
      View in: PubMed   Mentions: 1005     Fields:    Translation:HumansCells
    123. A second generation human haplotype map of over 3.1 million SNPs. Nature. 2007 Oct 18; 449(7164):851-61. International HapMap Consortium, Frazer KA, Ballinger DG, Cox DR, Hinds DA, Stuve LL, Gibbs RA, Belmont JW, Boudreau A, Hardenbol P, Leal SM, Pasternak S, Wheeler DA, Willis TD, Yu F, Yang H, Zeng C, Gao Y, Hu H, Hu W, Li C, Lin W, Liu S, Pan H, Tang X, Wang J, Wang W, Yu J, Zhang B, Zhang Q, Zhao H, Zhao H, Zhou J, Gabriel SB, Barry R, Blumenstiel B, Camargo A, Defelice M, Faggart M, Goyette M, Gupta S, Moore J, Nguyen H, Onofrio RC, Parkin M, Roy J, Stahl E, Winchester E, Ziaugra L, Altshuler D, Shen Y, Yao Z, Huang W, Chu X, He Y, Jin L, Liu Y, Shen Y, Sun W, Wang H, Wang Y, Wang Y, Xiong X, Xu L, Waye MM, Tsui SK, Xue H, Wong JT, Galver LM, Fan JB, Gunderson K, Murray SS, Oliphant AR, Chee MS, Montpetit A, Chagnon F, Ferretti V, Leboeuf M, Olivier JF, Phillips MS, Roumy S, Sallée C, Verner A, Hudson TJ, Kwok PY, Cai D, Koboldt DC, Miller RD, Pawlikowska L, Taillon-Miller P, Xiao M, Tsui LC, Mak W, Song YQ, Tam PK, Nakamura Y, Kawaguchi T, Kitamoto T, Morizono T, Nagashima A, Ohnishi Y, Sekine A, Tanaka T, Tsunoda T, Deloukas P, Bird CP, Delgado M, Dermitzakis ET, Gwilliam R, Hunt S, Morrison J, Powell D, Stranger BE, Whittaker P, Bentley DR, Daly MJ, de Bakker PI, Barrett J, Chretien YR, Maller J, McCarroll S, Patterson N, Pe'er I, Price A, Purcell S, Richter DJ, Sabeti P, Saxena R, Schaffner SF, Sham PC, Varilly P, Altshuler D, Stein LD, Krishnan L, Smith AV, Tello-Ruiz MK, Thorisson GA, Chakravarti A, Chen PE, Cutler DJ, Kashuk CS, Lin S, Abecasis GR, Guan W, Li Y, Munro HM, Qin ZS, Thomas DJ, McVean G, Auton A, Bottolo L, Cardin N, Eyheramendy S, Freeman C, Marchini J, Myers S, Spencer C, Stephens M, Donnelly P, Cardon LR, Clarke G, Evans DM, Morris AP, Weir BS, Tsunoda T, Mullikin JC, Sherry ST, Feolo M, Skol A, Zhang H, Zeng C, Zhao H, Matsuda I, Fukushima Y, Macer DR, Suda E, Rotimi CN, Adebamowo CA, Ajayi I, Aniagwu T, Marshall PA, Nkwodimmah C, Royal CD, Leppert MF, Dixon M, Peiffer A, Qiu R, Kent A, Kato K, Niikawa N, Adewole IF, Knoppers BM, Foster MW, Clayton EW, Watkin J, Gibbs RA, Belmont JW, Muzny D, Nazareth L, Sodergren E, Weinstock GM, Wheeler DA, Yakub I, Gabriel SB, Onofrio RC, Richter DJ, Ziaugra L, Birren BW, Daly MJ, Altshuler D, Wilson RK, Fulton LL, Rogers J, Burton J, Carter NP, Clee CM, Griffiths M, Jones MC, McLay K, Plumb RW, Ross MT, Sims SK, Willey DL, Chen Z, Han H, Kang L, Godbout M, Wallenburg JC, L'Archevêque P, Bellemare G, Saeki K, Wang H, An D, Fu H, Li Q, Wang Z, Wang R, Holden AL, Brooks LD, McEwen JE, Guyer MS, Wang VO, Peterson JL, Shi M, Spiegel J, Sung LM, Zacharia LF, Collins FS, Kennedy K, Jamieson R, Stewart J. PMID: 17943122; PMCID: PMC2689609.
      View in: PubMed   Mentions: 2314     Fields:    Translation:Humans
    124. New models of collaboration in genome-wide association studies: the Genetic Association Information Network. Nat Genet. 2007 Sep; 39(9):1045-51. GAIN Collaborative Research Group, Manolio TA, Rodriguez LL, Brooks L, Abecasis G, Collaborative Association Study of Psoriasis, Ballinger D, Daly M, Donnelly P, Faraone SV, International Multi-Center ADHD Genetics Project, Frazer K, Gabriel S, Gejman P, Molecular Genetics of Schizophrenia Collaboration, Guttmacher A, Harris EL, Insel T, Kelsoe JR, Bipolar Genome Study, Lander E, McCowin N, Mailman MD, Nabel E, Ostell J, Pugh E, Sherry S, Sullivan PF, Major Depression Stage 1 Genomewide Association in Population-Based Samples Study, Thompson JF, Warram J, Genetics of Kidneys in Diabetes (GoKinD) Study, Wholley D, Milos PM, Collins FS. PMID: 17728769.
      View in: PubMed   Mentions: 167     Fields:    Translation:Humans
    125. In vitro human keratinocyte migration rates are associated with SNPs in the KRT1 interval. PLoS One. 2007 Aug 01; 2(8):e697. Tao H, Berno AJ, Cox DR, Frazer KA. PMID: 17668073; PMCID: PMC1933256.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    126. A sequence-based variation map of 8.27 million SNPs in inbred mouse strains. Nature. 2007 Aug 30; 448(7157):1050-3. Frazer KA, Eskin E, Kang HM, Bogue MA, Hinds DA, Beilharz EJ, Gupta RV, Montgomery J, Morenzoni MM, Nilsen GB, Pethiyagoda CL, Stuve LL, Johnson FM, Daly MJ, Wade CM, Cox DR. PMID: 17660834.
      View in: PubMed   Mentions: 266     Fields:    Translation:AnimalsCells
    127. Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science. 2007 Jul 20; 317(5836):338-42. Clark RM, Schweikert G, Toomajian C, Ossowski S, Zeller G, Shinn P, Warthmann N, Hu TT, Fu G, Hinds DA, Chen H, Frazer KA, Huson DH, Schölkopf B, Nordborg M, Rätsch G, Ecker JR, Weigel D. PMID: 17641193.
      View in: PubMed   Mentions: 363     Fields:    Translation:AnimalsCells
    128. The genomics gold rush. JAMA. 2007 Jul 11; 298(2):218-21. Topol EJ, Murray SS, Frazer KA. PMID: 17622604.
      View in: PubMed   Mentions: 30     Fields:    Translation:Humans
    129. Evaluation of the SNP tagging approach in an independent population sample--array-based SNP discovery in Sami. Hum Genet. 2007 Sep; 122(2):141-50. Johansson A, Vavruch-Nilsson V, Cox DR, Frazer KA, Gyllensten U. PMID: 17554563.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    130. The resequencing imperative. Nat Genet. 2007 Apr; 39(4):439-40. Topol EJ, Frazer KA. PMID: 17392801.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    131. Allele-specific KRT1 expression is a complex trait. PLoS Genet. 2006 Jun; 2(6):e93. Tao H, Cox DR, Frazer KA. PMID: 16789827; PMCID: PMC1475705.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansCells
    132. Analysis of allelic differential expression in human white blood cells. Genome Res. 2006 Mar; 16(3):331-9. Pant PV, Tao H, Beilharz EJ, Ballinger DG, Cox DR, Frazer KA. PMID: 16467561; PMCID: PMC1415206.
      View in: PubMed   Mentions: 78     Fields:    Translation:HumansCells
    133. Variation in conserved non-coding sequences on chromosome 5q and susceptibility to asthma and atopy. Respir Res. 2005 Dec 10; 6:145. Donfack J, Schneider DH, Tan Z, Kurz T, Dubchak I, Frazer KA, Ober C. PMID: 16336695; PMCID: PMC1325232.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    134. Common deletions and SNPs are in linkage disequilibrium in the human genome. Nat Genet. 2006 Jan; 38(1):82-5. Hinds DA, Kloek AP, Jen M, Chen X, Frazer KA. PMID: 16327809.
      View in: PubMed   Mentions: 156     Fields:    Translation:Humans
    135. High-resolution whole-genome association study of Parkinson disease. Am J Hum Genet. 2005 Nov; 77(5):685-93. Maraganore DM, de Andrade M, Lesnick TG, Strain KJ, Farrer MJ, Rocca WA, Pant PV, Frazer KA, Cox DR, Ballinger DG. PMID: 16252231; PMCID: PMC1271381.
      View in: PubMed   Mentions: 204     Fields:    Translation:Humans
    136. Whole-genome patterns of common DNA variation in three human populations. Science. 2005 Feb 18; 307(5712):1072-9. Hinds DA, Stuve LL, Nilsen GB, Halperin E, Eskin E, Ballinger DG, Frazer KA, Cox DR. PMID: 15718463.
      View in: PubMed   Mentions: 450     Fields:    Translation:Humans
    137. Fine-scale recombination patterns differ between chimpanzees and humans. Nat Genet. 2005 Apr; 37(4):429-34. Ptak SE, Hinds DA, Koehler K, Nickel B, Patil N, Ballinger DG, Przeworski M, Frazer KA, Pääbo S. PMID: 15723063.
      View in: PubMed   Mentions: 146     Fields:    Translation:HumansAnimals
    138. Application of pooled genotyping to scan candidate regions for association with HDL cholesterol levels. Hum Genomics. 2004 Nov; 1(6):421-34. Hinds DA, Seymour AB, Durham LK, Banerjee P, Ballinger DG, Milos PM, Cox DR, Thompson JF, Frazer KA. PMID: 15606997; PMCID: PMC3500196.
      View in: PubMed   Mentions: 31     Fields:    Translation:Humans
    139. Segmental phylogenetic relationships of inbred mouse strains revealed by fine-scale analysis of sequence variation across 4.6 mb of mouse genome. Genome Res. 2004 Aug; 14(8):1493-500. Frazer KA, Wade CM, Hinds DA, Patil N, Cox DR, Daly MJ. PMID: 15289472; PMCID: PMC509258.
      View in: PubMed   Mentions: 36     Fields:    Translation:AnimalsCells
    140. VISTA: computational tools for comparative genomics. Nucleic Acids Res. 2004 Jul 01; 32(Web Server issue):W273-9. Frazer KA, Pachter L, Poliakov A, Rubin EM, Dubchak I. PMID: 15215394; PMCID: PMC441596.
      View in: PubMed   Mentions: 1262     Fields:    Translation:HumansCells
    141. The nature, pattern and function of human sequence variation. Genome Biol. 2004; 5(4):318. Eichler EE, Frazer KA. PMID: 15059253; PMCID: PMC395779.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    142. Noncoding sequences conserved in a limited number of mammals in the SIM2 interval are frequently functional. Genome Res. 2004 Mar; 14(3):367-72. Frazer KA, Tao H, Osoegawa K, de Jong PJ, Chen X, Doherty MF, Cox DR. PMID: 14962988; PMCID: PMC353216.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansAnimalsCells
    143. The Mouse Genome Database (MGD): integrating biology with the genome. Nucleic Acids Res. 2004 Jan 01; 32(Database issue):D476-81. Bult CJ, Blake JA, Richardson JE, Kadin JA, Eppig JT, Baldarelli RM, Barsanti K, Baya M, Beal JS, Boddy WJ, Bradt DW, Burkart DL, Butler NE, Campbell J, Corey R, Corbani LE, Cousins S, Dene H, Drabkin HJ, Frazer K, Garippa DM, Glass LH, Goldsmith CW, Grant PL, King BL, Lennon-Pierce M, Lewis J, Lu I, Lutz CM, Maltais LJ, McKenzie LM, Miers D, Modrusan D, Ni L, Ormsby JE, Qi D, Ramachandran S, Reddy TB, Reed DJ, Sinclair R, Shaw DR, Smith CL, Szauter P, Taylor B, Vanden Borre P, Walker M, Washburn L, Witham I, Winslow J, Zhu Y, Mouse Genome Database Group. PMID: 14681461; PMCID: PMC308859.
      View in: PubMed   Mentions: 34     Fields:    Translation:Animals
    144. Multi-species sequence comparison: the next frontier in genome annotation. Genome Biol. 2003; 4(12):122. Dubchak I, Frazer K. PMID: 14659006; PMCID: PMC329408.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    145. Genomic DNA insertions and deletions occur frequently between humans and nonhuman primates. Genome Res. 2003 Mar; 13(3):341-6. Frazer KA, Chen X, Hinds DA, Pant PV, Patil N, Cox DR. PMID: 12618364; PMCID: PMC430260.
      View in: PubMed   Mentions: 37     Fields:    Translation:HumansAnimalsCells
    146. Cross-species sequence comparisons: a review of methods and available resources. Genome Res. 2003 Jan; 13(1):1-12. Frazer KA, Elnitski L, Church DM, Dubchak I, Hardison RC. PMID: 12529301; PMCID: PMC430969.
      View in: PubMed   Mentions: 84     Fields:    Translation:HumansAnimalsCells
    147. Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21. Science. 2001 Nov 23; 294(5547):1719-23. Patil N, Berno AJ, Hinds DA, Barrett WA, Doshi JM, Hacker CR, Kautzer CR, Lee DH, Marjoribanks C, McDonough DP, Nguyen BT, Norris MC, Sheehan JB, Shen N, Stern D, Stokowski RP, Thomas DJ, Trulson MO, Vyas KR, Frazer KA, Fodor SP, Cox DR. PMID: 11721056.
      View in: PubMed   Mentions: 276     Fields:    Translation:HumansAnimalsCells
    148. VISTA : visualizing global DNA sequence alignments of arbitrary length. Bioinformatics. 2000 Nov; 16(11):1046-7. Mayor C, Brudno M, Schwartz JR, Poliakov A, Rubin EM, Frazer KA, Pachter LS, Dubchak I. PMID: 11159318.
      View in: PubMed   Mentions: 423     Fields:    Translation:HumansAnimals
    149. Active conservation of noncoding sequences revealed by three-way species comparisons. Genome Res. 2000 Sep; 10(9):1304-6. Dubchak I, Brudno M, Loots GG, Pachter L, Mayor C, Rubin EM, Frazer KA. PMID: 10984448; PMCID: PMC310906.
      View in: PubMed   Mentions: 113     Fields:    Translation:HumansAnimalsCells
    150. Database searches for binding sites. Science. 2000 Jun 30; 288(5475):2319a. Murphy K, Frazer KA, Loots G, Rubin EM. PMID: 17769838.
      View in: PubMed   Mentions:    Fields:    
    151. Faithful expression of the human 5q31 cytokine cluster in transgenic mice. J Immunol. 2000 May 01; 164(9):4569-74. Lacy DA, Wang ZE, Symula DJ, McArthur CJ, Rubin EM, Frazer KA, Locksley RM. PMID: 10779759.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    152. Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons. Science. 2000 Apr 07; 288(5463):136-40. Loots GG, Locksley RM, Blankespoor CM, Wang ZE, Miller W, Rubin EM, Frazer KA. PMID: 10753117.
      View in: PubMed   Mentions: 270     Fields:    Translation:HumansAnimalsCells
    153. PipMaker--a web server for aligning two genomic DNA sequences. Genome Res. 2000 Apr; 10(4):577-86. Schwartz S, Zhang Z, Frazer KA, Smit A, Riemer C, Bouck J, Gibbs R, Hardison R, Miller W. PMID: 10779500; PMCID: PMC310868.
      View in: PubMed   Mentions: 452     Fields:    Translation:HumansAnimalsCells
    154. Genomic interval engineering of mice identifies a novel modulator of triglyceride production. Proc Natl Acad Sci U S A. 2000 Feb 01; 97(3):1137-42. Zhu Y, Jong MC, Frazer KA, Gong E, Krauss RM, Cheng JF, Boffelli D, Rubin EM. PMID: 10655497; PMCID: PMC15548.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    155. Photoreceptor localization of the KIF3A and KIF3B subunits of the heterotrimeric microtubule motor kinesin II in vertebrate retina. Exp Eye Res. 1999 Nov; 69(5):491-503. Whitehead JL, Wang SY, Bost-Usinger L, Hoang E, Frazer KA, Burnside B. PMID: 10548469.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimalsCells
    156. Functional screening of an asthma QTL in YAC transgenic mice. Nat Genet. 1999 Oct; 23(2):241-4. Symula DJ, Frazer KA, Ueda Y, Denefle P, Stevens ME, Wang ZE, Locksley R, Rubin EM. PMID: 10508526.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    157. Computational and biological analysis of 680 kb of DNA sequence from the human 5q31 cytokine gene cluster region. Genome Res. 1997 May; 7(5):495-512. Frazer KA, Ueda Y, Zhu Y, Gifford VR, Garofalo MR, Mohandas N, Martin CH, Palazzolo MJ, Cheng JF, Rubin EM. PMID: 9149945.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
    158. The apolipoprotein(a) gene is regulated by sex hormones and acute-phase inducers in YAC transgenic mice. Nat Genet. 1995 Apr; 9(4):424-31. Frazer KA, Narla G, Zhang JL, Rubin EM. PMID: 7795650.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimalsCells
    159. Controlling the caloric labyrinthine stimulus: restoring surface temperature. Laryngoscope. 1993 Jun; 103(6):679-82. Proctor L, Frazer K, Thakor R. PMID: 8502103.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    160. A radiation hybrid map of the region on human chromosome 22 containing the neurofibromatosis type 2 locus. Genomics. 1992 Nov; 14(3):574-84. Frazer KA, Boehnke M, Budarf ML, Wolff RK, Emanuel BS, Myers RM, Cox DR. PMID: 1427886.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    161. Analysis of chromosome 22 deletions in neurofibromatosis type 2-related tumors. Am J Hum Genet. 1992 Sep; 51(3):478-85. Wolff RK, Frazer KA, Jackler RK, Lanser MJ, Pitts LH, Cox DR. PMID: 1496981; PMCID: PMC1682717.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    162. Epidemiology, pathogenesis, and genetics of acoustic tumors. Otolaryngol Clin North Am. 1992 Jun; 25(3):499-520. Lanser MJ, Sussman SA, Frazer K. PMID: 1625863.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    163. A novel and rapid method for isolating sequences adjacent to rare cutting sites and their use in physical mapping. Nucleic Acids Res. 1991 Aug 25; 19(16):4371-5. Patel K, Cox R, Shipley J, Kiely F, Frazer K, Cox DR, Lehrach H, Sheer D. PMID: 1886764; PMCID: PMC328622.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    164. Isolation and characterization of a laminin-binding protein from rat and chick muscle. J Cell Biol. 1988 Aug; 107(2):687-97. Hall DE, Frazer KA, Hann BC, Reichardt LF. PMID: 3417768; PMCID: PMC2115226.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells