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    Zhenjiang Xu

    TitlePostdoctoral Scholar
    SchoolUniversity of California, San Diego
    DepartmentPediatrics
    Address9500 Gilman Drive #0763
    CA La Jolla 92093
    vCardDownload vCard

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      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Debelius J, Song SJ, Vazquez-Baeza Y, Xu Z, Gonzalez A, Knight R. Tiny microbes, enormous impacts: what matters in gut microbiome studies? Genome Biol. 2016 Oct 19; 17(1):217. PMID: 27760558.
        View in: PubMed
      2. Gilbert JA, Quinn RA, Debelius J, Xu Z, Morton J, Garg N, Jansson JK, Dorrestein PC, Knight R. Microbiome-wide association studies link dynamic microbial consortia to disease. Nature. 2016 Jul 7; 535(7610):94-103. PMID: 27383984.
        View in: PubMed
      3. Song SJ, Amir A, Metcalf JL, Amato KR, Xu Z, Humphrey G, Knight R. Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies. mSystems. 2016 May-Jun; 1(3). PMID: 27822526.
        View in: PubMed
      4. Weiss S, Van Treuren W, Lozupone C, Faust K, Friedman J, Deng Y, Xia LC, Xu Z, Ursell L, Alm EJ, Birmingham A, Cram JA, Fuhrman JA, Raes J, Sun F, Zhou J, Knight R. Correlation detection strategies in microbial data sets vary widely in sensitivity and precision. ISME J. 2016 Jul; 10(7):1669-81. PMID: 26905627.
        View in: PubMed
      5. Kopylova E, Navas-Molina JA, Mercier C, Xu Z, Mahé F, He Y, Zhou HW, Rognes T, Caporaso JG, Knight R. Open-Source Sequence Clustering Methods Improve the State Of the Art. mSystems. 2016 Jan-Feb; 1(1). PMID: 27822515.
        View in: PubMed
      6. Xu Z, Mathews DH. Secondary Structure Prediction of Single Sequences Using RNAstructure. Methods Mol Biol. 2016; 1490:15-34. PMID: 27665590.
        View in: PubMed
      7. Xu Z, Mathews DH. Prediction of Secondary Structures Conserved in Multiple RNA Sequences. Methods Mol Biol. 2016; 1490:35-50. PMID: 27665591.
        View in: PubMed
      8. Xu Z, Mathews DH. Experiment-Assisted Secondary Structure Prediction with RNAstructure. Methods Mol Biol. 2016; 1490:163-76. PMID: 27665598.
        View in: PubMed
      9. Metcalf JL, Xu Z, Weiss S, Lax S, Van Treuren W, Hyde ER, Song SJ, Amir A, Larsen P, Sangwan N, Haarmann D, Humphrey GC, Ackermann G, Thompson LR, Lauber C, Bibat A, Nicholas C, Gebert MJ, Petrosino JF, Reed SC, Gilbert JA, Lynne AM, Bucheli SR, Carter DO, Knight R. Microbial community assembly and metabolic function during mammalian corpse decomposition. Science. 2016 Jan 8; 351(6269):158-62. PMID: 26657285.
        View in: PubMed
      10. Teng F, Yang F, Huang S, Bo C, Xu Z, Amir A, Knight R, Ling J, Xu J. Prediction of Early Childhood Caries via Spatial-Temporal Variations of Oral Microbiota. Cell Host Microbe. 2015 Sep 9; 18(3):296-306. PMID: 26355216.
        View in: PubMed
      11. Fu Y, Xu Z, Lu ZJ, Zhao S, Mathews DH. Discovery of Novel ncRNA Sequences in Multiple Genome Alignments on the Basis of Conserved and Stable Secondary Structures. PLoS One. 2015; 10(6):e0130200. PMID: 26075601.
        View in: PubMed