Yoav Freund

Title(s)	Professor, Computer Science and Engineering
School	Vc-academic Affairs
Address	9500 Gilman Drive # La Jolla CA 92093
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Research

Research Activities and Funding

Reverse Engineering the Brain Stem Circuits that Govern Exploratory Behavior
NIH U19NS107466Sep 15, 2018 - May 31, 2023
Role: Co-Principal Investigator

Revealing the connectivity and functionality of brain stem circuits
NIH U01NS090595Sep 30, 2014 - Jul 31, 2018
Role: Principal Investigator

Bibliographic

Publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

Altmetrics Details

PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

CellBoost: A pipeline for machine assisted annotation in Neuroanatomy. bioRxiv. 2024 Jan 21. Qian K, Friedman B, Takatoh J, Wang F, Kleinfeld D, Freund Y. PMID: 38293051; PMCID: PMC10827062.

View in: PubMed Mentions:
An active texture-based digital atlas enables automated mapping of structures and markers across brains. Nat Methods. 2019 04; 16(4):341-350. Chen Y, McElvain LE, Tolpygo AS, Ferrante D, Friedman B, Mitra PP, Karten HJ, Freund Y, Kleinfeld D. PMID: 30858600; PMCID: PMC6736610.

View in: PubMed Mentions: 16 Fields:
Cli Clinical Laboratory Techniques
Translation:Animals Cells
An online learning approach to occlusion boundary detection. IEEE Trans Image Process. 2012 Jan; 21(1):252-61. Jacobson N, Freund Y, Nguyen TQ. PMID: 21788193.

View in: PubMed Mentions: Fields:
Med Medical Informatics
Visualization of individual Scr mRNAs during Drosophila embryogenesis yields evidence for transcriptional bursting. Curr Biol. 2009 Dec 15; 19(23):2037-42. Paré A, Lemons D, Kosman D, Beaver W, Freund Y, McGinnis W. PMID: 19931455; PMCID: PMC2805773.

View in: PubMed Mentions: 59 Fields:
Bio Biology
Translation:Animals Cells
Image-based crystal detection: a machine-learning approach. Acta Crystallogr D Biol Crystallogr. 2008 Dec; 64(Pt 12):1187-95. Liu R, Freund Y, Spraggon G. PMID: 19018095; PMCID: PMC2585161.

View in: PubMed Mentions: 20 Fields:
Che Chemistry Techniques
Translation:Cells