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    Pavel Pevzner

    TitleProfessor
    SchoolUniversity of California, San Diego
    DepartmentComputer Science and Engineering
    Address9500 Gilman Drive #0404
    CA La Jolla 92093
    Phone858-822-4365
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      Collapse Research 
      Collapse Research Activities and Funding
      Integrated Active Learning Framework for Biomedical BD2K
      NIH/NIGMS R25GM114819Sep 29, 2014 - Aug 31, 2017
      Role: Principal Investigator
      New approaches to sequencing of complex peptides.
      NIH/NIGMS R01GM086283Sep 25, 2008 - Aug 31, 2012
      Role: Principal Investigator
      Center for Computational Mass Spectrometry
      NIH/NIGMS P41GM103484Sep 20, 2008 - Jun 30, 2019
      Role: Principal Investigator
      Center for Computational Mass-Spectrometry
      NIH/NCRR P41RR024851Sep 20, 2008 - Jun 30, 2013
      Role: Principal Investigator
      Algorithms &Software for Computational Mass Spectrometry
      NIH/NCRR R01RR016522Dec 1, 2001 - Aug 31, 2010
      Role: Principal Investigator
      A New Approach to Fragment Assembly in DNA Sequencing
      NIH/NHGRI R01HG002366Aug 24, 2001 - Jul 31, 2005
      Role: Principal Investigator
      Graduate Training Program in Bioinformatics
      NIH/NIGMS T32GM008806Jul 1, 2001 - Jun 30, 2021
      Role: Principal Investigator
      Comprehensive Biology: Exploiting the Yeast Genome
      NIH P41RR011823Sep 30, 1996 - Jun 30, 2016
      Role: Co-Investigator
      NATIONAL BIOMEDICAL COMPUTATION RESOURCE
      NIH P41RR008605Apr 15, 1994 - Apr 30, 2014
      Role: Co-Investigator
      ALGORITHMS AND SOFTWARE FOR SEQUENCING BY HYBRIDIZATION
      NIH/NHGRI R01HG000987Feb 7, 1994 - Jul 31, 1997
      Role: Principal Investigator

      Collapse Bibliographic 
      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Kolmogorov M, Kennedy E, Dong Z, Timp G, Pevzner P. Single-molecule protein identification by sub-nanopore sensors. PLoS Comput Biol. 2017 May; 13(5):e1005356. PMID: 28486472.
        View in: PubMed
      2. Nurk S, Meleshko D, Korobeynikov A, Pevzner P. metaSPAdes: a new versatile metagenomic assembler. Genome Res. 2017 May; 27(5):824-834. PMID: 28298430.
        View in: PubMed
      3. Fornelli L, Ayoub D, Aizikov K, Liu X, Damoc E, Pevzner P, Makarov A, Beck A, Tsybin YO. Top-down analysis of immunoglobulin G isotypes 1 and 2 with electron transfer dissociation on a high-field Orbitrap mass spectrometer. J Proteomics. 2017 Apr 21; 159:67-76. PMID: 28242452.
        View in: PubMed
      4. Garg N, Zeng Y, Edlund A, Melnik AV, Sanchez LM, Mohimani H, Gurevich A, Miao V, Schiffler S, Lim YW, Luzzatto-Knaan T, Cai S, Rohwer F, Pevzner P, Cichewicz RH, Alexandrov T, Dorrestein PC. Spatial Molecular Architecture of the Microbial Community of a Peltigera Lichen. mSystems. 2016 Nov-Dec; 1(6). PMID: 28028548.
        View in: PubMed
      5. Lin Y, Yuan J, Kolmogorov M, Shen MW, Chaisson M, Pevzner P. Assembly of long error-prone reads using de Bruijn graphs. Proc Natl Acad Sci U S A. 2016 Dec 12. PMID: 27956617.
        View in: PubMed
      6. Antipov D, Hartwick N, Shen M, Raiko M, Lapidus A, Pevzner P. plasmidSPAdes: assembling plasmids from whole genome sequencing data. Bioinformatics. 2016 Nov 15; 32(22):3380-3387. PMID: 27466620.
        View in: PubMed
      7. Bonissone SR, Pevzner P. Immunoglobulin Classification Using the Colored Antibody Graph. J Comput Biol. 2016 Jun; 23(6):483-94. PMID: 27149636.
        View in: PubMed
      8. Bankevich A, Pevzner P. TruSPAdes: barcode assembly of TruSeq synthetic long reads. Nat Methods. 2016 Mar; 13(3):248-50. PMID: 26828418.
        View in: PubMed
      9. Kolmogorov M, Liu X, Pevzner P. SpectroGene: A Tool for Proteogenomic Annotations Using Top-Down Spectra. J Proteome Res. 2016 Jan 4; 15(1):144-51. PMID: 26629978.
        View in: PubMed
      10. Antipov D, Korobeynikov A, McLean JS, Pevzner P. hybridSPAdes: an algorithm for hybrid assembly of short and long reads. Bioinformatics. 2016 Apr 1; 32(7):1009-15. PMID: 26589280.
        View in: PubMed
      11. Vyatkina K, Wu S, Dekker LJ, VanDuijn MM, Liu X, Tolic N, Dvorkin M, Alexandrova S, Luider TM, Paša-Tolic L, Pevzner P. De Novo Sequencing of Peptides from Top-Down Tandem Mass Spectra. J Proteome Res. 2015 Nov 6; 14(11):4450-62. PMID: 26412692.
        View in: PubMed
      12. León-Zayas R, Novotny M, Podell S, Shepard CM, Berkenpas E, Nikolenko S, Pevzner P, Lasken RS, Bartlett DH. Single Cells within the Puerto Rico Trench Suggest Hadal Adaptation of Microbial Lineages. Appl Environ Microbiol. 2015 Dec 15; 81(24):8265-76. PMID: 26386059.
        View in: PubMed
      13. Woo S, Cha SW, Bonissone S, Na S, Tabb DL, Pevzner P, Bafna V. Advanced Proteogenomic Analysis Reveals Multiple Peptide Mutations and Complex Immunoglobulin Peptides in Colon Cancer. J Proteome Res. 2015 Sep 4; 14(9):3555-67. PMID: 26139413.
        View in: PubMed
      14. Safonova Y, Bonissone S, Kurpilyansky E, Starostina E, Lapidus A, Stinson J, DePalatis L, Sandoval W, Lill J, Pevzner P. IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis. Bioinformatics. 2015 Jun 15; 31(12):i53-i61. PMID: 26072509.
        View in: PubMed
      15. Vasilinetc I, Prjibelski AD, Gurevich A, Korobeynikov A, Pevzner P. Assembling short reads from jumping libraries with large insert sizes. Bioinformatics. 2015 Oct 15; 31(20):3262-8. PMID: 26040456.
        View in: PubMed
      16. Safonova Y, Bankevich A, Pevzner P. dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes. J Comput Biol. 2015 Jun; 22(6):528-45. PMID: 25734602.
        View in: PubMed
      17. Pandey A, Pevzner P. Proteogenomics. Proteomics. 2014 Dec; 14(23-24):2631-2. PMID: 25469796.
        View in: PubMed
      18. Kim S, Pevzner P. MS-GF+ makes progress towards a universal database search tool for proteomics. Nat Commun. 2014; 5:5277. PMID: 25358478.
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      19. Lin Y, Nurk S, Pevzner P. What is the difference between the breakpoint graph and the de Bruijn graph? BMC Genomics. 2014 Oct 17; 15(Suppl 6):S6. PMID: 25572416.
        View in: PubMed
      20. Mohimani H, Liu WT, Kersten RD, Moore BS, Dorrestein PC, Pevzner P. NRPquest: Coupling Mass Spectrometry and Genome Mining for Nonribosomal Peptide Discovery. J Nat Prod. 2014 Aug 22; 77(8):1902-9. PMID: 25116163.
        View in: PubMed
      21. Liu X, Dekker LJ, Wu S, Vanduijn MM, Luider TM, Tolic N, Kou Q, Dvorkin M, Alexandrova S, Vyatkina K, Paša-Tolic L, Pevzner P. De novo protein sequencing by combining top-down and bottom-up tandem mass spectra. J Proteome Res. 2014 Jul 3; 13(7):3241-8. PMID: 24874765.
        View in: PubMed
      22. Prjibelski AD, Vasilinetc I, Bankevich A, Gurevich A, Krivosheeva T, Nurk S, Pham S, Korobeynikov A, Lapidus A, Pevzner P. ExSPAnder: a universal repeat resolver for DNA fragment assembly. Bioinformatics. 2014 Jun 15; 30(12):i293-i301. PMID: 24931996.
        View in: PubMed
      23. Mohimani H, Kersten RD, Liu WT, Wang M, Purvine SO, Wu S, Brewer HM, Pasa-Tolic L, Bandeira N, Moore BS, Pevzner P, Dorrestein PC. Automated genome mining of ribosomal Peptide natural products. ACS Chem Biol. 2014 Jul 18; 9(7):1545-51. PMID: 24802639.
        View in: PubMed
      24. Wu S, Brown JN, Tolic N, Meng D, Liu X, Zhang H, Zhao R, Moore RJ, Pevzner P, Smith RD, Paša-Tolic L. Quantitative analysis of human salivary gland-derived intact proteome using top-down mass spectrometry. Proteomics. 2014 May; 14(10):1211-22. PMID: 24591407.
        View in: PubMed
      25. Coates RC, Podell S, Korobeynikov A, Lapidus A, Pevzner P, Sherman DH, Allen EE, Gerwick L, Gerwick WH. Characterization of cyanobacterial hydrocarbon composition and distribution of biosynthetic pathways. PLoS One. 2014; 9(1):e85140. PMID: 24475038.
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      26. Terterov I, Vyatkina K, Kononikhin AS, Boitsov V, Vyazmin S, Popov IA, Nikolaev EN, Pevzner P, Dubina M. Application of de novo sequencing tools to study abiogenic peptide formations by tandem mass spectrometry. The case of homo-peptides from glutamic acid complicated by substitutions of hydrogen by sodium or potassium atoms. Rapid Commun Mass Spectrom. 2014 Jan 15; 28(1):33-41. PMID: 24285388.
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      27. Liu X, Hengel S, Wu S, Tolic N, Pasa-Tolic L, Pevzner P. Identification of ultramodified proteins using top-down tandem mass spectra. J Proteome Res. 2013 Dec 6; 12(12):5830-8. PMID: 24188097.
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      28. Nurk S, Bankevich A, Antipov D, Gurevich AA, Korobeynikov A, Lapidus A, Prjibelski AD, Pyshkin A, Sirotkin A, Sirotkin Y, Stepanauskas R, Clingenpeel SR, Woyke T, McLean JS, Lasken R, Tesler G, Alekseyev MA, Pevzner P. Assembling single-cell genomes and mini-metagenomes from chimeric MDA products. J Comput Biol. 2013 Oct; 20(10):714-37. PMID: 24093227.
        View in: PubMed
      29. Castellana NE, Lushnikov A, Rotkiewicz P, Sefcovic N, Pevzner P, Godzik A, Vyatkina K. MORPH-PRO: a novel algorithm and web server for protein morphing. Algorithms Mol Biol. 2013; 8(1):19. PMID: 23844614.
        View in: PubMed
      30. Jeong K, Kim S, Pevzner P. UniNovo: a universal tool for de novo peptide sequencing. Bioinformatics. 2013 Aug 15; 29(16):1953-62. PMID: 23766417.
        View in: PubMed
      31. McLean JS, Lombardo MJ, Badger JH, Edlund A, Novotny M, Yee-Greenbaum J, Vyahhi N, Hall AP, Yang Y, Dupont CL, Ziegler MG, Chitsaz H, Allen AE, Yooseph S, Tesler G, Pevzner P, Friedman RM, Nealson KH, Venter JC, Lasken RS. Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum. Proc Natl Acad Sci U S A. 2013 Jun 25; 110(26):E2390-9. PMID: 23754396.
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      32. Ansong C, Wu S, Meng D, Liu X, Brewer HM, Deatherage Kaiser BL, Nakayasu ES, Cort JR, Pevzner P, Smith RD, Heffron F, Adkins JN, Pasa-Tolic L. Top-down proteomics reveals a unique protein S-thiolation switch in Salmonella Typhimurium in response to infection-like conditions. Proc Natl Acad Sci U S A. 2013 Jun 18; 110(25):10153-8. PMID: 23720318.
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      33. McLean JS, Lombardo MJ, Ziegler MG, Novotny M, Yee-Greenbaum J, Badger JH, Tesler G, Nurk S, Lesin V, Brami D, Hall AP, Edlund A, Allen LZ, Durkin S, Reed S, Torriani F, Nealson KH, Pevzner P, Friedman R, Venter JC, Lasken RS. Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform. Genome Res. 2013 May; 23(5):867-77. PMID: 23564253.
        View in: PubMed
      34. Ivankov DN, Payne SH, Galperin MY, Bonissone S, Pevzner P, Frishman D. How many signal peptides are there in bacteria? Environ Microbiol. 2013 Apr; 15(4):983-90. PMID: 23556536.
        View in: PubMed
      35. Payne SH, Bonissone S, Wu S, Brown RN, Ivankov DN, Frishman D, Pasa-Tolic L, Smith RD, Pevzner P. Unexpected diversity of signal peptides in prokaryotes. MBio. 2012; 3(6). PMID: 23169999.
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      36. Bonissone S, Gupta N, Romine M, Bradshaw RA, Pevzner P. N-terminal protein processing: a comparative proteogenomic analysis. Mol Cell Proteomics. 2013 Jan; 12(1):14-28. PMID: 23001859.
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      37. Pham SK, Antipov D, Sirotkin A, Tesler G, Pevzner P, Alekseyev MA. Pathset graphs: a novel approach for comprehensive utilization of paired reads in genome assembly. J Comput Biol. 2013 Apr; 20(4):359-71. PMID: 22803627.
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      38. Ronen R, Boucher C, Chitsaz H, Pevzner P. SEQuel: improving the accuracy of genome assemblies. Bioinformatics. 2012 Jun 15; 28(12):i188-96. PMID: 22689760.
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      39. Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, Pyshkin AV, Sirotkin AV, Vyahhi N, Tesler G, Alekseyev MA, Pevzner P. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 2012 May; 19(5):455-77. PMID: 22506599.
        View in: PubMed
      40. Anderson WA, Amasino RM, Ares M, Banerjee U, Bartel B, Corces VG, Drennan CL, Elgin SC, Epstein IR, Fanning E, Guillette LJ, Handelsman J, Hatfull GF, Hoy RR, Kelley D, Leinwand LA, Losick R, Lu Y, Lynn DG, Neuhauser C, O'Dowd DK, Olivera T, Pevzner P, Richards-Kortum RR, Rine J, Sah RL, Strobel SA, Walker GC, Walt DR, Warner IM, Wessler S, Willard HF, Zare RN. Competencies: a cure for pre-med curriculum. Science. 2011 Nov 11; 334(6057):760-1. PMID: 22076362.
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      41. Compeau PE, Pevzner P, Tesler G. How to apply de Bruijn graphs to genome assembly. Nat Biotechnol. 2011 Nov; 29(11):987-91. PMID: 22068540.
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      42. Mohimani H, Liu WT, Yang YL, Gaudêncio SP, Fenical W, Dorrestein PC, Pevzner P. Multiplex de novo sequencing of peptide antibiotics. J Comput Biol. 2011 Nov; 18(11):1371-81. PMID: 22035290.
        View in: PubMed
      43. Liu X, Sirotkin Y, Shen Y, Anderson G, Tsai YS, Ting YS, Goodlett DR, Smith RD, Bafna V, Pevzner P. Protein identification using top-down. Mol Cell Proteomics. 2012 Jun; 11(6):M111.008524. PMID: 22027200.
        View in: PubMed
      44. Medvedev P, Pham S, Chaisson M, Tesler G, Pevzner P. Paired de bruijn graphs: a novel approach for incorporating mate pair information into genome assemblers. J Comput Biol. 2011 Nov; 18(11):1625-34. PMID: 21999285.
        View in: PubMed
      45. Chitsaz H, Yee-Greenbaum JL, Tesler G, Lombardo MJ, Dupont CL, Badger JH, Novotny M, Rusch DB, Fraser LJ, Gormley NA, Schulz-Trieglaff O, Smith GP, Evers DJ, Pevzner P, Lasken RS. Efficient de novo assembly of single-cell bacterial genomes from short-read data sets. Nat Biotechnol. 2011 Oct; 29(10):915-21. PMID: 21926975.
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      46. Mohimani H, Liu WT, Mylne JS, Poth AG, Colgrave ML, Tran D, Selsted ME, Dorrestein PC, Pevzner P. Cycloquest: identification of cyclopeptides via database search of their mass spectra against genome databases. J Proteome Res. 2011 Oct 7; 10(10):4505-12. PMID: 21851130.
        View in: PubMed
      47. Mohimani H, Yang YL, Liu WT, Hsieh PW, Dorrestein PC, Pevzner P. Sequencing cyclic peptides by multistage mass spectrometry. Proteomics. 2011 Sep; 11(18):3642-50. PMID: 21751357.
        View in: PubMed
      48. Medvedev P, Scott E, Kakaradov B, Pevzner P. Error correction of high-throughput sequencing datasets with non-uniform coverage. Bioinformatics. 2011 Jul 1; 27(13):i137-41. PMID: 21685062.
        View in: PubMed
      49. Frank AM, Monroe ME, Shah AR, Carver JJ, Bandeira N, Moore RJ, Anderson GA, Smith RD, Pevzner P. Spectral archives: extending spectral libraries to analyze both identified and unidentified spectra. Nat Methods. 2011 Jul; 8(7):587-91. PMID: 21572408.
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      50. Pevzner P, Shamir R. Preface: 2nd Satellite Meeting on Bioinformatics Education, Research in Computational Molecular Biology (RECOMB-BE 2010). J Comput Biol. 2011 Jul; 18(7):865. PMID: 21563980.
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      51. Gupta N, Bandeira N, Keich U, Pevzner P. Target-decoy approach and false discovery rate: when things may go wrong. J Am Soc Mass Spectrom. 2011 Jul; 22(7):1111-20. PMID: 21953092.
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      52. Mevers E, Liu WT, Engene N, Mohimani H, Byrum T, Pevzner P, Dorrestein PC, Spadafora C, Gerwick WH. Cytotoxic veraguamides, alkynyl bromide-containing cyclic depsipeptides from the marine cyanobacterium cf. Oscillatoria margaritifera. J Nat Prod. 2011 May 27; 74(5):928-36. PMID: 21488639.
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      53. Grindberg RV, Ishoey T, Brinza D, Esquenazi E, Coates RC, Liu WT, Gerwick L, Dorrestein PC, Pevzner P, Lasken R, Gerwick WH. Single cell genome amplification accelerates identification of the apratoxin biosynthetic pathway from a complex microbial assemblage. PLoS One. 2011; 6(4):e18565. PMID: 21533272.
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      54. Jeong K, Kim S, Bandeira N, Pevzner P. Gapped spectral dictionaries and their applications for database searches of tandem mass spectra. Mol Cell Proteomics. 2011 Jun; 10(6):M110.002220. PMID: 21444829.
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      55. Alekseyev MA, Pevzner P. Comparative genomics reveals birth and death of fragile regions in mammalian evolution. Genome Biol. 2010; 11(11):R117. PMID: 21118492.
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      56. Gupta N, Bark SJ, Lu WD, Taupenot L, O'Connor DT, Pevzner P, Hook V. Mass spectrometry-based neuropeptidomics of secretory vesicles from human adrenal medullary pheochromocytoma reveals novel peptide products of prohormone processing. J Proteome Res. 2010 Oct 1; 9(10):5065-75. PMID: 20704348.
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      57. Liu X, Inbar Y, Dorrestein PC, Wynne C, Edwards N, Souda P, Whitelegge JP, Bafna V, Pevzner P. Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approach. Mol Cell Proteomics. 2010 Dec; 9(12):2772-82. PMID: 20855543.
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      58. Kim S, Mischerikow N, Bandeira N, Navarro JD, Wich L, Mohammed S, Heck AJ, Pevzner P. The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search. Mol Cell Proteomics. 2010 Dec; 9(12):2840-52. PMID: 20829449.
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      59. Liu WT, Yang YL, Xu Y, Lamsa A, Haste NM, Yang JY, Ng J, Gonzalez D, Ellermeier CD, Straight PD, Pevzner P, Pogliano J, Nizet V, Pogliano K, Dorrestein PC. Imaging mass spectrometry of intraspecies metabolic exchange revealed the cannibalistic factors of Bacillus subtilis. Proc Natl Acad Sci U S A. 2010 Sep 14; 107(37):16286-90. PMID: 20805502.
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      60. Pham SK, Pevzner P. DRIMM-Synteny: decomposing genomes into evolutionary conserved segments. Bioinformatics. 2010 Oct 15; 26(20):2509-16. PMID: 20736338.
        View in: PubMed
      61. Hook V, Bark S, Gupta N, Lortie M, Lu WD, Bandeira N, Funkelstein L, Wegrzyn J, O'Connor DT, Pevzner P. Neuropeptidomic components generated by proteomic functions in secretory vesicles for cell-cell communication. AAPS J. 2010 Dec; 12(4):635-45. PMID: 20734175.
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      62. Gupta N, Hixson KK, Culley DE, Smith RD, Pevzner P. Analyzing protease specificity and detecting in vivo proteolytic events using tandem mass spectrometry. Proteomics. 2010 Aug; 10(15):2833-44. PMID: 20597098.
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      63. Leão PN, Pereira AR, Liu WT, Ng J, Pevzner P, Dorrestein PC, König GM, Vasconcelos VM, Gerwick WH. Synergistic allelochemicals from a freshwater cyanobacterium. Proc Natl Acad Sci U S A. 2010 Jun 22; 107(25):11183-8. PMID: 20534563.
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      64. Gupta N, Pevzner P. False discovery rates of protein identifications: a strike against the two-peptide rule. J Proteome Res. 2009 Sep; 8(9):4173-81. PMID: 19627159.
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      65. Pevzner P, Shamir R. Computing has changed biology--biology education must catch up. Science. 2009 Jul 31; 325(5940):541-2. PMID: 19644094.
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      66. Ng J, Bandeira N, Liu WT, Ghassemian M, Simmons TL, Gerwick WH, Linington R, Dorrestein PC, Pevzner P. Dereplication and de novo sequencing of nonribosomal peptides. Nat Methods. 2009 Aug; 6(8):596-9. PMID: 19597502.
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      67. Liu WT, Ng J, Meluzzi D, Bandeira N, Gutierrez M, Simmons TL, Schultz AW, Linington RG, Moore BS, Gerwick WH, Pevzner P, Dorrestein PC. Interpretation of tandem mass spectra obtained from cyclic nonribosomal peptides. Anal Chem. 2009 Jun 1; 81(11):4200-9. PMID: 19413302.
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      68. Kim S, Bandeira N, Pevzner P. Spectral profiles, a novel representation of tandem mass spectra and their applications for de novo peptide sequencing and identification. Mol Cell Proteomics. 2009 Jun; 8(6):1391-400. PMID: 19254948.
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      69. Alekseyev MA, Pevzner P. Breakpoint graphs and ancestral genome reconstructions. Genome Res. 2009 May; 19(5):943-57. PMID: 19218533.
        View in: PubMed
      70. Chaisson MJ, Brinza D, Pevzner P. De novo fragment assembly with short mate-paired reads: Does the read length matter? Genome Res. 2009 Feb; 19(2):336-46. PMID: 19056694.
        View in: PubMed
      71. Bandeira N, Pham V, Pevzner P, Arnott D, Lill JR. Automated de novo protein sequencing of monoclonal antibodies. Nat Biotechnol. 2008 Dec; 26(12):1336-8. PMID: 19060866.
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      72. Pevzner P, Kim S, Ng J. Comment on "Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry". Science. 2008 Aug 22; 321(5892):1040; author reply 1040. PMID: 18719266.
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      73. Kim S, Gupta N, Bandeira N, Pevzner P. Spectral dictionaries: Integrating de novo peptide sequencing with database search of tandem mass spectra. Mol Cell Proteomics. 2009 Jan; 8(1):53-69. PMID: 18703573.
        View in: PubMed
      74. Kim S, Gupta N, Pevzner P. Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases. J Proteome Res. 2008 Aug; 7(8):3354-63. PMID: 18597511.
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      75. Bandeira N, Olsen JV, Mann JV, Mann M, Pevzner P. Multi-spectra peptide sequencing and its applications to multistage mass spectrometry. Bioinformatics. 2008 Jul 1; 24(13):i416-23. PMID: 18785330.
        View in: PubMed
      76. Gupta N, Benhamida J, Bhargava V, Goodman D, Kain E, Kerman I, Nguyen N, Ollikainen N, Rodriguez J, Wang J, Lipton MS, Romine M, Bafna V, Smith RD, Pevzner P. Comparative proteogenomics: combining mass spectrometry and comparative genomics to analyze multiple genomes. Genome Res. 2008 Jul; 18(7):1133-42. PMID: 18426904.
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      77. Frank AM, Pesavento JJ, Mizzen CA, Kelleher NL, Pevzner P. Interpreting top-down mass spectra using spectral alignment. Anal Chem. 2008 Apr 1; 80(7):2499-505. PMID: 18302345.
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      78. Ng J, Pevzner P. Algorithm for identification of fusion proteins via mass spectrometry. J Proteome Res. 2008 Jan; 7(1):89-95. PMID: 18173219.
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      79. Chaisson MJ, Pevzner P. Short read fragment assembly of bacterial genomes. Genome Res. 2008 Feb; 18(2):324-30. PMID: 18083777.
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      80. Frank AM, Bandeira N, Shen Z, Tanner S, Briggs SP, Smith RD, Pevzner P. Clustering millions of tandem mass spectra. J Proteome Res. 2008 Jan; 7(1):113-22. PMID: 18067247.
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      81. Rodriguez J, Gupta N, Smith RD, Pevzner P. Does trypsin cut before proline? J Proteome Res. 2008 Jan; 7(1):300-5. PMID: 18067249.
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      82. Jiang Z, Tang H, Ventura M, Cardone MF, Marques-Bonet T, She X, Pevzner P, Eichler EE. Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution. Nat Genet. 2007 Nov; 39(11):1361-8. PMID: 17922013.
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      83. Alekseyev MA, Pevzner P. Are there rearrangement hotspots in the human genome? PLoS Comput Biol. 2007 Nov; 3(11):e209. PMID: 17997591.
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      84. Gupta N, Tanner S, Jaitly N, Adkins JN, Lipton M, Edwards R, Romine M, Osterman A, Bafna V, Smith RD, Pevzner P. Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation. Genome Res. 2007 Sep; 17(9):1362-77. PMID: 17690205.
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      85. Waridel P, Frank A, Thomas H, Surendranath V, Sunyaev S, Pevzner P, Shevchenko A. Sequence similarity-driven proteomics in organisms with unknown genomes by LC-MS/MS and automated de novo sequencing. Proteomics. 2007 Jul; 7(14):2318-29. PMID: 17623296.
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      86. Sundquist A, Ronaghi M, Tang H, Pevzner P, Batzoglou S. Whole-genome sequencing and assembly with high-throughput, short-read technologies. PLoS One. 2007; 2(5):e484. PMID: 17534434.
        View in: PubMed
      87. Bandeira N, Clauser KR, Pevzner P. Shotgun protein sequencing: assembly of peptide tandem mass spectra from mixtures of modified proteins. Mol Cell Proteomics. 2007 Jul; 6(7):1123-34. PMID: 17446555.
        View in: PubMed
      88. Bandeira N, Tsur D, Frank A, Pevzner P. Protein identification by spectral networks analysis. Proc Natl Acad Sci U S A. 2007 Apr 10; 104(15):6140-5. PMID: 17404225.
        View in: PubMed
      89. Frank AM, Savitski MM, Nielsen ML, Zubarev RA, Pevzner P. De novo peptide sequencing and identification with precision mass spectrometry. J Proteome Res. 2007 Jan; 6(1):114-23. PMID: 17203955.
        View in: PubMed
      90. Zhi D, Keich U, Pevzner P, Heber S, Tang H. Correcting base-assignment errors in repeat regions of shotgun assembly. IEEE/ACM Trans Comput Biol Bioinform. 2007 Jan-Mar; 4(1):54-64. PMID: 17277413.
        View in: PubMed
      91. Alekseyev MA, Pevzner P. Colored de Bruijn graphs and the genome halving problem. IEEE/ACM Trans Comput Biol Bioinform. 2007 Jan-Mar; 4(1):98-107. PMID: 17277417.
        View in: PubMed
      92. Chaisson MJ, Raphael BJ, Pevzner P. Microinversions in mammalian evolution. Proc Natl Acad Sci U S A. 2006 Dec 26; 103(52):19824-9. PMID: 17189424.
        View in: PubMed
      93. Chong KF, Ning K, Leong HW, Pevzner P. Modeling and characterization of multi-charge mass spectra for peptide sequencing. J Bioinform Comput Biol. 2006 Dec; 4(6):1329-52. PMID: 17245817.
        View in: PubMed
      94. Zhi D, Krishna SS, Cao H, Pevzner P, Godzik A. Representing and comparing protein structures as paths in three-dimensional space. BMC Bioinformatics. 2006; 7:460. PMID: 17052359.
        View in: PubMed
      95. Wilmarth PA, Tanner S, Dasari S, Nagalla SR, Riviere MA, Bafna V, Pevzner P, David LL. Age-related changes in human crystallins determined from comparative analysis of post-translational modifications in young and aged lens: does deamidation contribute to crystallin insolubility? J Proteome Res. 2006 Oct; 5(10):2554-66. PMID: 17022627.
        View in: PubMed
      96. Wielsch N, Thomas H, Surendranath V, Waridel P, Frank A, Pevzner P, Shevchenko A. Rapid validation of protein identifications with the borderline statistical confidence via de novo sequencing and MS BLAST searches. J Proteome Res. 2006 Sep; 5(9):2448-56. PMID: 16944958.
        View in: PubMed
      97. Jones NC, Pevzner P. Comparative genomics reveals unusually long motifs in mammalian genomes. Bioinformatics. 2006 Jul 15; 22(14):e236-42. PMID: 16873477.
        View in: PubMed
      98. Bourque G, Tesler G, Pevzner P. The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction. Genome Res. 2006 Mar; 16(3):311-3. PMID: 16510896.
        View in: PubMed
      99. Peng Q, Pevzner P, Tesler G. The fragile breakage versus random breakage models of chromosome evolution. PLoS Comput Biol. 2006 Feb; 2(2):e14. PMID: 16501665.
        View in: PubMed
      100. Volik S, Raphael BJ, Huang G, Stratton MR, Bignel G, Murnane J, Brebner JH, Bajsarowicz K, Paris PL, Tao Q, Kowbel D, Lapuk A, Shagin DA, Shagina IA, Gray JW, Cheng JF, de Jong PJ, Pevzner P, Collins C. Decoding the fine-scale structure of a breast cancer genome and transcriptome. Genome Res. 2006 Mar; 16(3):394-404. PMID: 16461635.
        View in: PubMed
      101. Zhi D, Raphael BJ, Price AL, Tang H, Pevzner P. Identifying repeat domains in large genomes. Genome Biol. 2006; 7(1):R7. PMID: 16507140.
        View in: PubMed
      102. Tanner S, Pevzner P, Bafna V. Unrestrictive identification of post-translational modifications through peptide mass spectrometry. Nat Protoc. 2006; 1(1):67-72. PMID: 17406213.
        View in: PubMed
      103. Tsur D, Tanner S, Zandi E, Bafna V, Pevzner P. Identification of post-translational modifications by blind search of mass spectra. Nat Biotechnol. 2005 Dec; 23(12):1562-7. PMID: 16311586.
        View in: PubMed
      104. Murphy WJ, Larkin DM, Everts-van der Wind A, Bourque G, Tesler G, Auvil L, Beever JE, Chowdhary BP, Galibert F, Gatzke L, Hitte C, Meyers SN, Milan D, Ostrander EA, Pape G, Parker HG, Raudsepp T, Rogatcheva MB, Schook LB, Skow LC, Welge M, Womack JE, O'brien SJ, Pevzner P, Lewin HA. Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. Science. 2005 Jul 22; 309(5734):613-7. PMID: 16040707.
        View in: PubMed
      105. Tanner S, Shu H, Frank A, Wang LC, Zandi E, Mumby M, Pevzner P, Bafna V. InsPecT: identification of posttranslationally modified peptides from tandem mass spectra. Anal Chem. 2005 Jul 15; 77(14):4626-39. PMID: 16013882.
        View in: PubMed
      106. Frank A, Tanner S, Bafna V, Pevzner P. Peptide sequence tags for fast database search in mass-spectrometry. J Proteome Res. 2005 Jul-Aug; 4(4):1287-95. PMID: 16083278.
        View in: PubMed
      107. Price AL, Jones NC, Pevzner P. De novo identification of repeat families in large genomes. Bioinformatics. 2005 Jun; 21 Suppl 1:i351-8. PMID: 15961478.
        View in: PubMed
      108. Frank A, Pevzner P. PepNovo: de novo peptide sequencing via probabilistic network modeling. Anal Chem. 2005 Feb 15; 77(4):964-73. PMID: 15858974.
        View in: PubMed
      109. Tsur D, Tanner S, Zandi E, Bafna V, Pevzner P. Identification of post-translational modifications via blind search of mass-spectra. Proc IEEE Comput Syst Bioinform Conf. 2005; 157-66. PMID: 16447973.
        View in: PubMed
      110. Bandeira N, Tang H, Bafna V, Pevzner P. Shotgun protein sequencing by tandem mass spectra assembly. Anal Chem. 2004 Dec 15; 76(24):7221-33. PMID: 15595863.
        View in: PubMed
      111. Bourque G, Zdobnov EM, Bork P, Pevzner P, Tesler G. Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages. Genome Res. 2005 Jan; 15(1):98-110. PMID: 15590940.
        View in: PubMed
      112. Murphy WJ, Pevzner P, O'Brien SJ. Mammalian phylogenomics comes of age. Trends Genet. 2004 Dec; 20(12):631-9. PMID: 15522459.
        View in: PubMed
      113. Price AL, Eskin E, Pevzner P. Whole-genome analysis of Alu repeat elements reveals complex evolutionary history. Genome Res. 2004 Nov; 14(11):2245-52. PMID: 15520288.
        View in: PubMed
      114. Raphael B, Zhi D, Tang H, Pevzner P. A novel method for multiple alignment of sequences with repeated and shuffled elements. Genome Res. 2004 Nov; 14(11):2336-46. PMID: 15520295.
        View in: PubMed
      115. Pevzner PA, Pevzner PA, Tang H, Tesler G. De novo repeat classification and fragment assembly. Genome Res. 2004 Sep; 14(9):1786-96. PMID: 15342561.
        View in: PubMed
      116. Raphael BJ, Pevzner P. Reconstructing tumor amplisomes. Bioinformatics. 2004 Aug 4; 20 Suppl 1:i265-73. PMID: 15262808.
        View in: PubMed
      117. Leipzig J, Pevzner P, Heber S. The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome. Nucleic Acids Res. 2004; 32(13):3977-83. PMID: 15292448.
        View in: PubMed
      118. Andelfinger G, Hitte C, Etter L, Guyon R, Bourque G, Tesler G, Pevzner P, Kirkness E, Galibert F, Benson DW. Detailed four-way comparative mapping and gene order analysis of the canine ctvm locus reveals evolutionary chromosome rearrangements. Genomics. 2004 Jun; 83(6):1053-62. PMID: 15177558.
        View in: PubMed
      119. Pevzner P. Educating biologists in the 21st century: bioinformatics scientists versus bioinformatics technicians. Bioinformatics. 2004 Sep 22; 20(14):2159-61. PMID: 15073013.
        View in: PubMed
      120. Chaisson M, Pevzner P, Tang H. Fragment assembly with short reads. Bioinformatics. 2004 Sep 1; 20(13):2067-74. PMID: 15059830.
        View in: PubMed
      121. Bourque G, Pevzner P, Tesler G. Reconstructing the genomic architecture of ancestral mammals: lessons from human, mouse, and rat genomes. Genome Res. 2004 Apr; 14(4):507-16. PMID: 15059991.
        View in: PubMed
      122. Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, Dugan-Rocha S, Miner G, Morgan M, Hawes A, Gill R. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 2004 Apr 1; 428(6982):493-521. PMID: 15057822.
        View in: PubMed
      123. Kahng AB, Mandoiu II, Pevzner P, Reda S, Zelikovsky AZ. Scalable heuristics for design of DNA probe arrays. J Comput Biol. 2004; 11(2-3):429-47. PMID: 15285900.
        View in: PubMed
      124. Murphy WJ, Bourque G, Tesler G, Pevzner P, O'Brien SJ. Reconstructing the genomic architecture of mammalian ancestors using multispecies comparative maps. Hum Genomics. 2003 Nov; 1(1):30-40. PMID: 15601531.
        View in: PubMed
      125. Raphael BJ, Volik S, Collins C, Pevzner P. Reconstructing tumor genome architectures. Bioinformatics. 2003 Oct; 19 Suppl 2:ii162-71. PMID: 14534186.
        View in: PubMed
      126. Price A, Ramabhadran S, Pevzner P. Finding subtle motifs by branching from sample strings. Bioinformatics. 2003 Oct; 19 Suppl 2:ii149-55. PMID: 14534184.
        View in: PubMed
      127. Pevzner P, Tesler G. Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution. Proc Natl Acad Sci U S A. 2003 Jun 24; 100(13):7672-7. PMID: 12810957.
        View in: PubMed
      128. Eskin E, Keich U, Gelfand MS, Pevzner P. Genome-wide analysis of bacterial promoter regions. Pac Symp Biocomput. 2003; 29-40. PMID: 12603015.
        View in: PubMed
      129. Pevzner P, Tesler G. Genome rearrangements in mammalian evolution: lessons from human and mouse genomes. Genome Res. 2003 Jan; 13(1):37-45. PMID: 12529304.
        View in: PubMed
      130. Initial sequencing and comparative analysis of the mouse genome. Nature. 2002 Dec 5; 420(6915):520-62. PMID: 12466850.
        View in: PubMed
      131. Lunyak VV, Burgess R, Prefontaine GG, Nelson C, Sze SH, Chenoweth J, Schwartz P, Pevzner P, Glass C, Mandel G, Rosenfeld MG. Corepressor-dependent silencing of chromosomal regions encoding neuronal genes. Science. 2002 Nov 29; 298(5599):1747-52. PMID: 12399542.
        View in: PubMed
      132. Keich U, Pevzner P. Subtle motifs: defining the limits of motif finding algorithms. Bioinformatics. 2002 Oct; 18(10):1382-90. PMID: 12376383.
        View in: PubMed
      133. Keich U, Pevzner P. Finding motifs in the twilight zone. Bioinformatics. 2002 Oct; 18(10):1374-81. PMID: 12376382.
        View in: PubMed
      134. Bourque G, Pevzner P. Genome-scale evolution: reconstructing gene orders in the ancestral species. Genome Res. 2002 Jan; 12(1):26-36. PMID: 11779828.
        View in: PubMed
      135. Hannenhalli S, Hubell E, Lipshutz R, Pevzner P. Combinatorial algorithms for design of DNA arrays. Adv Biochem Eng Biotechnol. 2002; 77:1-19. PMID: 12227732.
        View in: PubMed
      136. Eskin E, Pevzner P. Finding composite regulatory patterns in DNA sequences. Bioinformatics. 2002; 18 Suppl 1:S354-63. PMID: 12169566.
        View in: PubMed
      137. Heber S, Alekseyev M, Sze SH, Tang H, Pevzner P. Splicing graphs and EST assembly problem. Bioinformatics. 2002; 18 Suppl 1:S181-8. PMID: 12169546.
        View in: PubMed
      138. Mulyukov Z, Pevzner P. EULER-PCR: finishing experiments for repeat resolution. Pac Symp Biocomput. 2002; 199-210. PMID: 11928476.
        View in: PubMed
      139. Sze SH, Gelfand MS, Pevzner P. Finding weak motifs in DNA sequences. Pac Symp Biocomput. 2002; 235-46. PMID: 11928479.
        View in: PubMed
      140. Pevzner P. Assembling puzzles from preassembled blocks. Genome Res. 2001 Sep; 11(9):1461-2. PMID: 11544188.
        View in: PubMed
      141. Pevzner P, Tang H, Waterman MS. An Eulerian path approach to DNA fragment assembly. Proc Natl Acad Sci U S A. 2001 Aug 14; 98(17):9748-53. PMID: 11504945.
        View in: PubMed
      142. Arslan AN, Egecioglu O, Pevzner P. A new approach to sequence comparison: normalized sequence alignment. Bioinformatics. 2001 Apr; 17(4):327-37. PMID: 11301301.
        View in: PubMed
      143. Pevzner P, Mulyukov Z, Dancik V, Tang CL. Efficiency of database search for identification of mutated and modified proteins via mass spectrometry. Genome Res. 2001 Feb; 11(2):290-9. PMID: 11157792.
        View in: PubMed
      144. Pevzner P, Tang H. Fragment assembly with double-barreled data. Bioinformatics. 2001; 17 Suppl 1:S225-33. PMID: 11473013.
        View in: PubMed
      145. Pevzner P, Sze SH. Combinatorial approaches to finding subtle signals in DNA sequences. Proc Int Conf Intell Syst Mol Biol. 2000; 8:269-78. PMID: 10977088.
        View in: PubMed
      146. Pevzner P, Dancík V, Tang CL. Mutation-tolerant protein identification by mass spectrometry. J Comput Biol. 2000; 7(6):777-87. PMID: 11382361.
        View in: PubMed
      147. Dancík V, Addona TA, Clauser KR, Vath JE, Pevzner P. De novo peptide sequencing via tandem mass spectrometry. J Comput Biol. 1999 Fall-Winter; 6(3-4):327-42. PMID: 10582570.
        View in: PubMed
      148. Hubbell E, Pevzner P. Fidelity probes for DNA arrays. Proc Int Conf Intell Syst Mol Biol. 1999; 113-7. PMID: 10786293.
        View in: PubMed
      149. Mironov AA, Pevzner P. SST versus EST in gene recognition. Microb Comp Genomics. 1999; 4(3):167-72. PMID: 10587944.
        View in: PubMed
      150. Mironov AA, Roytberg MA, Pevzner P, Gelfand MS. Performance-guarantee gene predictions via spliced alignment. Genomics. 1998 Aug 1; 51(3):332-9. PMID: 9721203.
        View in: PubMed
      151. Xu G, Sze SH, Liu CP, Pevzner P, Arnheim N. Gene hunting without sequencing genomic clones: finding exon boundaries in cDNAs. Genomics. 1998 Jan 15; 47(2):171-9. PMID: 9479489.
        View in: PubMed
      152. Sze SH, Roytberg MA, Gelfand MS, Mironov AA, Astakhova TV, Pevzner P. Algorithms and software for support of gene identification experiments. Bioinformatics. 1998; 14(1):14-9. PMID: 9520497.
        View in: PubMed
      153. Belyi I, Pevzner P. Software for DNA sequencing by hybridization. Comput Appl Biosci. 1997 Apr; 13(2):205-10. PMID: 9146969.
        View in: PubMed
      154. Sze SH, Pevzner P. Las Vegas algorithms for gene recognition: suboptimal and error-tolerant spliced alignment. J Comput Biol. 1997; 4(3):297-309. PMID: 9278061.
        View in: PubMed
      155. Gelfand MS, Mironov AA, Pevzner P. Gene recognition via spliced sequence alignment. Proc Natl Acad Sci U S A. 1996 Aug 20; 93(17):9061-6. PMID: 8799154.
        View in: PubMed
      156. Hannenhalli S, Feldman W, Lewis HF, Skiena SS, Pevzner P. Positional sequencing by hybridization. Comput Appl Biosci. 1996 Feb; 12(1):19-24. PMID: 8670615.
        View in: PubMed
      157. Hannenhalli S, Chappey C, Koonin EV, Pevzner P. Genome sequence comparison and scenarios for gene rearrangements: a test case. Genomics. 1995 Nov 20; 30(2):299-311. PMID: 8586431.
        View in: PubMed
      158. Mironov AA, Alexandrov NN. DNASUN: a package of computer programs for the biotechnology laboratory. Comput Appl Biosci. 1995 Jun; 11(3):331-5. PMID: 7583703.
        View in: PubMed
      159. Pevzner P. Combinatorial methods for DNA mapping and sequencing. J Comput Biol. 1995; 2(2):153-8. PMID: 7497124.
        View in: PubMed
      160. Pevzner P. Rearrangements of DNA sequences and SBH. Comput Chem. 1994 Sep; 18(3):221-3. PMID: 7952892.
        View in: PubMed
      161. Feldman W, Pevzner P. Gray code masks for sequencing by hybridization. Genomics. 1994 Sep 1; 23(1):233-5. PMID: 7829077.
        View in: PubMed
      162. Pevzner P. Statistical distance between texts and filtration methods in sequence comparison. Comput Appl Biosci. 1992 Apr; 8(2):121-7. PMID: 1591607.
        View in: PubMed
      163. Gelfand MS, Kozhukhin CG, Pevzner P. Extendable words in nucleotide sequences. Comput Appl Biosci. 1992 Apr; 8(2):129-35. PMID: 1375526.
        View in: PubMed
      164. Pevzner P. Improved chips for sequencing by hybridization. J Biomol Struct Dyn. 1991 Oct; 9(2):399-410. PMID: 1741970.
        View in: PubMed
      165. Pevzner P, Lysov IuP, Khrapko KR, Beliavskii AV, Florent'ev VL, Mirzabekov AD. [Optimal chips for megabase DNA sequencing]. Mol Biol (Mosk). 1991 Mar-Apr; 25(2):552-62. PMID: 1881398.
        View in: PubMed
      166. Kozhukhin CG, Pevzner P. Genome inhomogeneity is determined mainly by WW and SS dinucleotides. Comput Appl Biosci. 1991 Jan; 7(1):39-49. PMID: 2004273.
        View in: PubMed
      167. Pevzner P. 1-Tuple DNA sequencing: computer analysis. J Biomol Struct Dyn. 1989 Aug; 7(1):63-73. PMID: 2684223.
        View in: PubMed
      168. Pevzner P, Veiko VP. [Paths in graphs and selection of oligonucleotide linkers]. Mol Biol (Mosk). 1989 Jul-Aug; 23(4):1075-9. PMID: 2555681.
        View in: PubMed
      169. Pevzner P. Linguistics of nucleotide sequences. II: Stationary words in genetic texts and the zonal structure of DNA. J Biomol Struct Dyn. 1989 Apr; 6(5):1027-38. PMID: 2531597.
        View in: PubMed
      170. Pevzner P. Linguistics of nucleotide sequences. I: The significance of deviations from mean statistical characteristics and prediction of the frequencies of occurrence of words. J Biomol Struct Dyn. 1989 Apr; 6(5):1013-26. PMID: 2531596.
        View in: PubMed
      171. Pevzner P, Mironov AA. [Effective method for physical mapping the DNA molecule]. Mol Biol (Mosk). 1987 May-Jun; 21(3):788-96. PMID: 3657777.
        View in: PubMed