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Yana Safonova
Title
Postdoctoral Scholar
School
University of California, San Diego
Department
Qualcomm Institute
Address
9500 Gilman Drive #0436
CA La Jolla 92093
Email
isafonova@ucsd.edu
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Overview
Interests
graph theory
,
software engineering
,
genomics
,
immunology
,
bioinformatics
ORNG Applications
Twitter
Bibliographic
Publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can
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Shlemov A, Bankevich S, Bzikadze A, Turchaninova MA,
Safonova Y
, Pevzner PA. Reconstructing Antibody Repertoires from Error-Prone Immunosequencing Reads. J Immunol. 2017 Nov 01; 199(9):3369-3380. PMID: 28978691.
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PubMed
Baranova MA, Logacheva MD, Penin AA, Seplyarskiy VB,
Safonova Y
, Naumenko SA, Klepikova AV, Gerasimov ES, Bazykin GA, James TY, Kondrashov AS. Extraordinary Genetic Diversity in a Wood Decay Mushroom. Mol Biol Evol. 2015 Oct; 32(10):2775-83. PMID: 26163667; PMCID: PMC4576712.
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PubMed
,
PubMed Central
Safonova Y
, Bonissone S, Kurpilyansky E, Starostina E, Lapidus A, Stinson J, DePalatis L, Sandoval W, Lill J, Pevzner PA. IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis. Bioinformatics. 2015 Jun 15; 31(12):i53-61. PMID: 26072509; PMCID: PMC4542777.
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PubMed Central
Safonova Y
, Lapidus A, Lill J. IgSimulator: a versatile immunosequencing simulator. Bioinformatics. 2015 Oct 01; 31(19):3213-5. PMID: 26007226.
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PubMed
Safonova Y
, Bankevich A, Pevzner PA. dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes. J Comput Biol. 2015 Jun; 22(6):528-45. PMID: 25734602; PMCID: PMC4449708.
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Year
Publications
2015
4
2017
1
Yana's Networks
Concepts
Derived automatically from this person's publications.
Algorithms
Antibodies
High-Throughput Nucleotide Sequencing
Immunoglobulins
Sequence Analysis, DNA
See all (23) concept(s)
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Co-Authors
People in Profiles who have published with this person.
Pevzner, Pavel
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