Garrison Cottrell

Title(s)Recall Faculty, Computer Science and Engineering
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    Collapse Research Activities and Funding
    Unified Computation Tools for Natural Products Research
    NIH R01GM107550Sep 5, 2013 - Apr 30, 2025
    Role: Co-Principal Investigator
    Modeling Face Perception
    NIH R01MH057075Aug 1, 1998 - Jun 30, 2008
    Role: Principal Investigator
    ELUCIDATING CENTRAL PATTERN GENERATORS
    NIH R01MH046899Mar 1, 1992 - Dec 31, 1995
    Role: Principal Investigator
    LEARNING SIMPLE ARITHMETIC PROCEDURE
    NIH R03MH046054May 1, 1990 - Apr 30, 1991
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. PECAN Predicts Patterns of Cancer Cell Cytostatic Activity of Natural Products Using Deep Learning. J Nat Prod. 2024 Mar 22; 87(3):567-575. Gahl M, Kim HW, Glukhov E, Gerwick WH, Cottrell GW. PMID: 38349959; PMCID: PMC10960629.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    2. DeepSAT: Learning Molecular Structures from Nuclear Magnetic Resonance Data. J Cheminform. 2023 Aug 07; 15(1):71. Kim HW, Zhang C, Reher R, Wang M, Alexander KL, Nothias LF, Han YK, Shin H, Lee KY, Lee KH, Kim MJ, Dorrestein PC, Gerwick WH, Cottrell GW. PMID: 37550756; PMCID: PMC10406729.
      View in: PubMed   Mentions:
    3. Adversarial Joint-Learning Recurrent Neural Network for Incomplete Time Series Classification. IEEE Trans Pattern Anal Mach Intell. 2022 04; 44(4):1765-1776. Ma Q, Li S, Cottrell GW. PMID: 32997624.
      View in: PubMed   Mentions: 2     Fields:    
    4. SMART-Miner: A convolutional neural network-based metabolite identification from 1 H-13 C HSQC spectra. Magn Reson Chem. 2022 Nov; 60(11):1070-1075. Kim HW, Zhang C, Cottrell GW, Gerwick WH. PMID: 34928526.
      View in: PubMed   Mentions: 7     Fields:    
    5. NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products. J Nat Prod. 2021 11 26; 84(11):2795-2807. Kim HW, Wang M, Leber CA, Nothias LF, Reher R, Kang KB, van der Hooft JJJ, Dorrestein PC, Gerwick WH, Cottrell GW. PMID: 34662515; PMCID: PMC8631337.
      View in: PubMed   Mentions: 64     Fields:    Translation:Cells
    6. End-to-End Incomplete Time-Series Modeling From Linear Memory of Latent Variables. IEEE Trans Cybern. 2020 Dec; 50(12):4908-4920. Ma Q, Li S, Shen L, Wang J, Wei J, Yu Z, Cottrell GW. PMID: 30990205.
      View in: PubMed   Mentions: 2     Fields:    
    7. The ventral striatum dissociates information expectation, reward anticipation, and reward receipt. Proc Natl Acad Sci U S A. 2020 06 30; 117(26):15200-15208. Filimon F, Nelson JD, Sejnowski TJ, Sereno MI, Cottrell GW. PMID: 32527855; PMCID: PMC7334472.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    8. Author Correction: Small Molecule Accurate Recognition Technology (SMART) to Enhance Natural Products Research. Sci Rep. 2020 Mar 10; 10(1):4724. Zhang C, Idelbayev Y, Roberts N, Tao Y, Nannapaneni Y, Duggan BM, Min J, Lin EC, Gerwick EC, Cottrell GW, Gerwick WH. PMID: 32152329; PMCID: PMC7062778.
      View in: PubMed   Mentions:    Fields:    
    9. A Convolutional Neural Network-Based Approach for the Rapid Annotation of Molecularly Diverse Natural Products. J Am Chem Soc. 2020 03 04; 142(9):4114-4120. Reher R, Kim HW, Zhang C, Mao HH, Wang M, Nothias LF, Caraballo-Rodriguez AM, Glukhov E, Teke B, Leao T, Alexander KL, Duggan BM, Van Everbroeck EL, Dorrestein PC, Cottrell GW, Gerwick WH. PMID: 32045230; PMCID: PMC7210566.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    10. Pagoamide A, a Cyclic Depsipeptide Isolated from a Cultured Marine Chlorophyte, Derbesia sp., Using MS/MS-Based Molecular Networking. J Nat Prod. 2020 03 27; 83(3):617-625. Li Y, Yu HB, Zhang Y, Leao T, Glukhov E, Pierce ML, Zhang C, Kim H, Mao HH, Fang F, Cottrell GW, Murray TF, Gerwick L, Guan H, Gerwick WH. PMID: 31916778; PMCID: PMC7210564.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    11. Time series classification with Echo Memory Networks. Neural Netw. 2019 Sep; 117:225-239. Ma Q, Zhuang W, Shen L, Cottrell GW. PMID: 31176962.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    12. Small Molecule Accurate Recognition Technology (SMART) to Enhance Natural Products Research. Sci Rep. 2017 10 27; 7(1):14243. Zhang C, Idelbayev Y, Roberts N, Tao Y, Nannapaneni Y, Duggan BM, Min J, Lin EC, Gerwick EC, Cottrell GW, Gerwick WH. PMID: 29079836; PMCID: PMC5660213.
      View in: PubMed   Mentions: 33     Fields:    Translation:Cells
    13. Central and peripheral vision for scene recognition: A neurocomputational modeling exploration. J Vis. 2017 04 01; 17(4):9. Wang P, Cottrell GW. PMID: 28437797.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    14. Are Face and Object Recognition Independent? A Neurocomputational Modeling Exploration. J Cogn Neurosci. 2016 Apr; 28(4):558-74. Wang P, Gauthier I, Cottrell G. PMID: 26741802.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    15. Humans have idiosyncratic and task-specific scanpaths for judging faces. Vision Res. 2015 Mar; 108:67-76. Kanan C, Bseiso DN, Ray NA, Hsiao JH, Cottrell GW. PMID: 25641371.
      View in: PubMed   Mentions: 27     Fields:    Translation:Humans
    16. Observed, Executed, and Imagined Action Representations can be Decoded From Ventral and Dorsal Areas. Cereb Cortex. 2015 Sep; 25(9):3144-58. Filimon F, Rieth CA, Sereno MI, Cottrell GW. PMID: 24862848.
      View in: PubMed   Mentions: 30     Fields:    Translation:Humans
    17. What evidence supports special processing for faces? A cautionary tale for fMRI interpretation. J Cogn Neurosci. 2013 Nov; 25(11):1777-93. Cowell RA, Cottrell GW. PMID: 23859648.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    18. Hemispheric asymmetry in perception: a differential encoding account. J Cogn Neurosci. 2013 Jul; 25(7):998-1007. Hsiao JH, Cipollini B, Cottrell GW. PMID: 23448523.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    19. Color-to-grayscale: does the method matter in image recognition? PLoS One. 2012; 7(1):e29740. Kanan C, Cottrell GW. PMID: 22253768; PMCID: PMC3254613.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimals
    20. Evidence and a computational explanation of cultural differences in facial expression recognition. Emotion. 2010 Dec; 10(6):874-93. Dailey MN, Joyce C, Lyons MJ, Kamachi M, Ishi H, Gyoba J, Cottrell GW. PMID: 21171759; PMCID: PMC7360061.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    21. Experience matters: information acquisition optimizes probability gain. Psychol Sci. 2010 Jul; 21(7):960-9. Nelson JD, McKenzie CR, Cottrell GW, Sejnowski TJ. PMID: 20525915; PMCID: PMC2926803.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    22. SUN: Top-down saliency using natural statistics. Vis cogn. 2009 Aug 01; 17(6-7):979-1003. Kanan C, Tong MH, Zhang L, Cottrell GW. PMID: 21052485; PMCID: PMC2967792.
      View in: PubMed   Mentions: 33     Fields:    
    23. Not all visual expertise is holistic, but it may be leftist: the case of Chinese character recognition. Psychol Sci. 2009 Apr; 20(4):455-63. Hsiao JH, Cottrell GW. PMID: 19399974.
      View in: PubMed   Mentions: 29     Fields:    Translation:Humans
    24. SUN: A Bayesian framework for saliency using natural statistics. J Vis. 2008 Dec 16; 8(7):32.1-20. Zhang L, Tong MH, Marks TK, Shan H, Cottrell GW. PMID: 19146264; PMCID: PMC7360059.
      View in: PubMed   Mentions: 67     Fields:    Translation:Humans
    25. Convergence of the visual field split: hemispheric modeling of face and object recognition. J Cogn Neurosci. 2008 Dec; 20(12):2298-307. Hsiao JH, Shieh DX, Cottrell GW. PMID: 18457514; PMCID: PMC7360338.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    26. NIMBLE: a kernel density model of saccade-based visual memory. J Vis. 2008 Nov 12; 8(14):17.1-14. Barrington L, Marks TK, Hsiao JH, Cottrell GW. PMID: 19146318; PMCID: PMC7360058.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    27. Two fixations suffice in face recognition. Psychol Sci. 2008 Oct; 19(10):998-1006. Hsiao JH, Cottrell G. PMID: 19000210; PMCID: PMC7360057.
      View in: PubMed   Mentions: 107     Fields:    Translation:Humans
    28. The roles of visual expertise and visual input in the face inversion effect: behavioral and neurocomputational evidence. Vision Res. 2008 Feb; 48(5):703-15. McCleery JP, Zhang L, Ge L, Wang Z, Christiansen EM, Lee K, Cottrell GW. PMID: 18226826; PMCID: PMC2267768.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    29. Why is the fusiform face area recruited for novel categories of expertise? A neurocomputational investigation. Brain Res. 2008 Apr 02; 1202:14-24. Tong MH, Joyce CA, Cottrell GW. PMID: 17959155; PMCID: PMC2443406.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    30. Learning grammatical structure with Echo State Networks. Neural Netw. 2007 Apr; 20(3):424-32. Tong MH, Bickett AD, Christiansen EM, Cottrell GW. PMID: 17556116.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    31. A probabilistic model of eye movements in concept formation. Neurocomputing (Amst). 2007 Aug 01; 70(13-15):2256-2272. Nelson JD, Cottrell GW. PMID: 22787288; PMCID: PMC3392133.
      View in: PubMed   Mentions: 9  
    32. Computer science. New life for neural networks. Science. 2006 Jul 28; 313(5786):454-5. Cottrell GW. PMID: 16873635.
      View in: PubMed   Mentions: 2     Fields:    
    33. Early selection of diagnostic facial information in the human visual cortex. Vision Res. 2006 Mar; 46(6-7):800-13. Joyce CA, Schyns PG, Gosselin F, Cottrell GW, Rossion B. PMID: 16266735.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    34. Transmitting and decoding facial expressions. Psychol Sci. 2005 Mar; 16(3):184-9. Smith ML, Cottrell GW, Gosselin F, Schyns PG. PMID: 15733197.
      View in: PubMed   Mentions: 192     Fields:    Translation:Humans
    35. Imaging reveals synaptic targets of a swim-terminating neuron in the leech CNS. J Neurosci. 2003 Dec 10; 23(36):11402-10. Taylor AL, Cottrell GW, Kleinfeld D, Kristan WB. PMID: 14673004; PMCID: PMC6740517.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    36. Early lateralization and orientation tuning for face, word, and object processing in the visual cortex. Neuroimage. 2003 Nov; 20(3):1609-24. Rossion B, Joyce CA, Cottrell GW, Tarr MJ. PMID: 14642472.
      View in: PubMed   Mentions: 232     Fields:    Translation:HumansCTClinical Trials
    37. EMPATH: a neural network that categorizes facial expressions. J Cogn Neurosci. 2002 Nov 15; 14(8):1158-73. Dailey MN, Cottrell GW, Padgett C, Adolphs R. PMID: 12495523.
      View in: PubMed   Mentions: 30     Fields:    Translation:Humans
    38. Analysis of oscillations in a reciprocally inhibitory network with synaptic depression. Neural Comput. 2002 Mar; 14(3):561-81. Taylor AL, Cottrell GW, Kristan WB. PMID: 11860683.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    39. Organization of face and object recognition in modular neural network models. Neural Netw. 1999 Oct; 12(7-8):1053-1074. Dailey MN, Cottrell GW. PMID: 12662645.
      View in: PubMed   Mentions: 20     Fields:    
    40. Prosopagnosia in modular neural network models. Prog Brain Res. 1999; 121:165-84. Dailey MN, Cottrell GW. PMID: 10551026.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    41. Kainic acid-induced generalized seizures alter the regional hippocampal expression of the rat m1 and m3 muscarinic acetylcholine receptor genes. Epilepsy Res. 1997 Dec; 29(1):71-9. Mingo NS, Cottrell G, Zhang L, Wallace MC, Burnham WM, Eubanks JH. PMID: 9416461.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    42. Time-delay neural networks: representation and induction of finite-state machines. IEEE Trans Neural Netw. 1997; 8(5):1065-70. Clouse DS, Giles CL, Horne BG, Cottrell GW. PMID: 18255709.
      View in: PubMed   Mentions: 2     Fields:    
    43. Learning in recurrent finite difference networks. Int J Neural Syst. 1995 Sep; 6(3):249-56. Tsung FS, Cottrell GW. PMID: 8589862.
      View in: PubMed   Mentions:    Fields:    
    44. Cognitive Binding: A Computational-Modeling Analysis of a Distinction between Implicit and Explicit Memory. J Cogn Neurosci. 1992; 4(3):289-98. Metcalfe J, Cottrell GW, Mencl WE. PMID: 23964885.
      View in: PubMed   Mentions: 4     Fields:    
    45. Function of identified interneurons in the leech elucidated using neural networks trained by back-propagation. Nature. 1989 Aug 10; 340(6233):468-71. Lockery SR, Wittenberg G, Kristan WB, Cottrell GW. PMID: 2755509.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
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